Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00142 ATGGAGTTACTGGGAGGGATCAATCCTCTTCCTACTACTACTGAACACGAGAACGAAACCCATTTCTTCAAAGACCAAAACCACCACCAGCAACATGATTTCAACTTTGATAACTTGATTCTAGAAGATTTCAACTTCGAACCTACTCTGGAACCAACACATGGGTTTCAAGAAACAAGAGGGATAAAGAATCAAGAAGTGGCAAGTCCACAACTTGTTAGATACAAGAAGCAAGCTCCACCATCTTCTTTAGCATCACTAGAGCTTCTGAAGAATTATGGAAGCAGGTTCAAGTGGCTAAAGGGTAAAAACCTAAGAAAAATTGAAACTTGTGCGAGTCCCCAGAACCAGAAGCTGTCAACTGAAGACATAATAAGAGTGGCAGGAGCAAGGTATATCCAACACTCAACACAATGGCATGATAATCTTTGCATCCCTATGCATCCATATGGAACTGGTCTTGTGGGTTTGTCTGAGGAAGAAAATAGAGATGTTGAACTTGCTCAGTTTCTTCTTGCAGCCGCAGAGAGGGTAGGGTGTCAACAATTTGAACGTGCAAGCATGTTACTTTACCATTGTCAATTGAATTCACCAGATGGTGGAAGCCCCGTTCAGCGTGTTGTCTTTCATTTCGCTCAAGCACTTAGAGAAAGAATCAACAAAGAAATAGGAGGAAGGGTGGCATTGAAGGGAGGTGAGAAAAATGAAGAAAGGGAATTGATTGAGAATTTGTTATTGGATACTAACATAGCCATTATATGTCACCAAAAAATTCCTTTCAATCAGGTGATGCAGTTTGCTGGTGTACAAGCTATAGTGGAACATGTTGCATCCCAAACCAAAATCCATCTGATAGATCTTGATATTGGACATGGGGTGTTGTGCACATGTTTCATGCAAGCATTGGCAGAGCGCAAGGAAAGGCCAGTTGAGCTTCTGAAGATCACTGCCATTGGAATTGTAGGCAAGATCAACCTAGAAGAGACAGGAAAAAGGTTAATGAGTTTTGCTAAATCCTTGAACTTGCCCCTTTTATATAAATCAGTTTATATTACAGACATGATAGAGATCAAGGTAGAACAATTTGAAATTGAAGATGATGAAGCTGTGGCTATCTATTCTCCTTATTTACTAAGGACTATGATATCAAATTCTGATTGCTTGGAGAACTTGATGAAGGTGATAAGGAAAATCAAACCATCTATAATGATAGTTCTTGAATTGGAAGCGAACCATAATTGTCCCTCCTTTGTGAATCGCTTTGTTGAAGCATTGTTCTTCTTTTCCGCATATTTTGACTGCATTGAGACCTGCATAAAACAGGATTATGAGTGCAGAATGAGAATAGAAGGGATATTATCTGAAGGGATAAGAAACATTGTTGCTATGGAAGATAGAGAAAGGACTGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACAGAATGGTGGAAACTGGATTTAGCGAGTCATCTCTGTATCAAGCTAACTTGGTTGCCAAGAAATTTGGTTGTGGGAATTTCTGTACTATAGATAAAAATGGGAAATGTCTAATAGTTGGATGGAAGGGAACCCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTGA 1623 0.3937 MELLGGINPLPTTTEHENETHFFKDQNHHQQHDFNFDNLILEDFNFEPTLEPTHGFQETRGIKNQEVASPQLVRYKKQAPPSSLASLELLKNYGSRFKWLKGKNLRKIETCASPQNQKLSTEDIIRVAGARYIQHSTQWHDNLCIPMHPYGTGLVGLSEEENRDVELAQFLLAAAERVGCQQFERASMLLYHCQLNSPDGGSPVQRVVFHFAQALRERINKEIGGRVALKGGEKNEERELIENLLLDTNIAIICHQKIPFNQVMQFAGVQAIVEHVASQTKIHLIDLDIGHGVLCTCFMQALAERKERPVELLKITAIGIVGKINLEETGKRLMSFAKSLNLPLLYKSVYITDMIEIKVEQFEIEDDEAVAIYSPYLLRTMISNSDCLENLMKVIRKIKPSIMIVLELEANHNCPSFVNRFVEALFFFSAYFDCIETCIKQDYECRMRIEGILSEGIRNIVAMEDRERTVRNVKIDVWRRFFARYRMVETGFSESSLYQANLVAKKFGCGNFCTIDKNGKCLIVGWKGTPIHSISAWKFL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00142 540 ProSiteProfiles GRAS family profile. 158 538 IPR005202 -
Sebi81g00142 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 122 528 IPR005202 -
Sebi81g00142 540 Pfam GRAS domain family 168 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00142 Sebi-Chr81 2013545 2015167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00142 165 539 GRAS Transcription Factor Family AT1G66350 28.571 3.72e-46 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi81g00142 GRAS 2e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00142 - - gmx:100791952 678.322