Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00123 ATGGTTCCGAAATCCCATTTCCTTGTCATTCTATTTCTGCTTTCAACGTTATGCATCACTTGCAGTTCCAGCTCAGATAAGCAGGCTGATTTTGATAAGTGGATATCTTGGAATGTGAAGAATTACAAGGAAAAGACCATTTTGAAAACCAAATGGAACGTGGCTACACCTGGTGCTGCTCTAGATTTGAAGCTGAGGCAGGCTGAAAGTAACAAAGTTAGAATAAGAGTTAGCCAAGACGGTTCTGGTGACTTCAAGACCATTACAGAAGCTCTTAATAGCATTCCACCTCGCAACACTAGGAGAGTCATACTGTTGATTGCACCAGGGAACGCGACGGATCCACCAACCATTACTGGAAATGATACAGCGTCTGTCACTGGAAGAGATGGGACTCCCATAGGGACGTTCCAGAGTGCAACTGTTGCTGTGGATGCTACCTATTTTATGGCCATCAACATAAAATTCGAGAACACTGCTCCGCATGCGATTGGAAAGGTGGGGGAACAAGCTGTGGCGCTTCGTATCTCAGGAACCAAAGCTGCTTTTTACAATTGCACTTTCTATGGGGCTCAAGACACACTCTATGATCACAAAGGCCTTCACTACTTCAATAATTGCTTTATTCAAGGCTCTGTTGATTTCATCTTCGGCTCCGGAAGGTCCCTTTACGAGAACTGTTATCTAAATTCCATAACCAAGAAGGTGGCTTCCATCACTGCTCAAAAGCGTACAAATTCGTCATTGGAGAGTGGATTTTCGTTCAAAAACAGCATAGTAACAGGTAGTGGGCAGGTTTATCTTGGAAGAGCATGGGGAGATTATTCCAGAGTTGTATTCTCTTACACCTACATGGACAACATAGTTCACCCCAGAGGATGGAGTGATTGGGGTGACCAAAAGCGTGACTTGGGTGTATATTATGGAGAATACAAGTGCAGTGGGCCAGGAGCTAACTTGAGTGGAAGAGTGCCATGGGCACGGGTACTTACGGACGAAGAGGCCAACCCTTTTATTGGGATTCACTTCATTCAAGGGAACACTTGGCTCATTACCCCCTAA 1062 0.4482 MVPKSHFLVILFLLSTLCITCSSSSDKQADFDKWISWNVKNYKEKTILKTKWNVATPGAALDLKLRQAESNKVRIRVSQDGSGDFKTITEALNSIPPRNTRRVILLIAPGNATDPPTITGNDTASVTGRDGTPIGTFQSATVAVDATYFMAINIKFENTAPHAIGKVGEQAVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCFIQGSVDFIFGSGRSLYENCYLNSITKKVASITAQKRTNSSLESGFSFKNSIVTGSGQVYLGRAWGDYSRVVFSYTYMDNIVHPRGWSDWGDQKRDLGVYYGEYKCSGPGANLSGRVPWARVLTDEEANPFIGIHFIQGNTWLITP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00123 353 SUPERFAMILY Pectin lyase-like 74 350 IPR011050 -
Sebi81g00123 353 FunFam Pectinesterase 69 353 - -
Sebi81g00123 353 Gene3D - 67 352 IPR012334 -
Sebi81g00123 353 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 62 350 - -
Sebi81g00123 353 ProSitePatterns Pectinesterase signature 2. 209 218 IPR033131 -
Sebi81g00123 353 Pfam Pectinesterase 75 347 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00123 Sebi-Chr81 1681433 1683573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00123 7 353 Carbohydrate Esterase AT5G07430 37.778 4.73e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00123 K01051 - qsu:112011696 527.324