Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00122 ATGGAGATGATGCAGTACTCGAAGAGTAGTGTTCATGTGATGAGAAGTTTATCAGATTGTGGAGTAACACATGGAAATGGAAGTGAAGAAGGGATGGTAATAAGGAAAGGTCCATGGACAGAGGAAGAGGATTCTGTTCTGATCAACTACGTCCACGTCCATGGCGAAGGGCTAAAGCGAACAGGAAAAAGCTGCAGATTAAGATGGTTGAACTACTTGCGTCCAAATGTTCGACGTGGGAACATTACCCTCCAAGAACAGCTCCTGATTCTTGACCTTCATTCCCGCTGGGGCAATCGGTGGTCTAAAATAGCAGAACAATTGCCTGGGAGAACAGACAATGAGATCAAGAACTATTGGAGGACCAGAGTGGTGAAACTGGCAAGGCAACTCAAATGTGATGTTAACAGCAAACAGTTTAGAGACACCTTGCGTTTTGTTTGGATGCCACGCCTCATGGAGAGGATTCAGGCCTCTAGTCCTTCTTCCCATAGCCATGACCAAACTAGTGTCTGTAGAACTACTCAAGCCCATAGTGAATCCTGTGGGGCCAATCCCCTCATGGTGTCAGAGGTTTCGTCGTTCTCTTCAGGGGTTGATGTTCAAGTTCAACCTCCTTCTCTCTCTGAATCAAGCTTATCTACTTACAATTTAATGGGCGGTAGTAACTGGTCACCAGATAGTGCTGAAATTGGATATTCCACACCTACACCATTGCAATGGAACTGCTCAGACATGCAAGCATTTGAACTAGGCAATGGTTTTGGCAGTGCTGACTTGTGGACTGATGAAAACATATGGTTCTTGCAGCAGCAGCTAGCTGATGATTTATGA 834 0.4532 MEMMQYSKSSVHVMRSLSDCGVTHGNGSEEGMVIRKGPWTEEEDSVLINYVHVHGEGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKLARQLKCDVNSKQFRDTLRFVWMPRLMERIQASSPSSHSHDQTSVCRTTQAHSESCGANPLMVSEVSSFSSGVDVQVQPPSLSESSLSTYNLMGGSNWSPDSAEIGYSTPTPLQWNCSDMQAFELGNGFGSADLWTDENIWFLQQQLADDL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00122 277 Gene3D - 83 124 - -
Sebi81g00122 277 CDD SANT 83 122 IPR001005 -
Sebi81g00122 277 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 34 192 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi81g00122 277 Gene3D - 34 79 - -
Sebi81g00122 277 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Sebi81g00122 277 Pfam Myb-like DNA-binding domain 36 73 IPR001005 -
Sebi81g00122 277 SMART sant 78 126 IPR001005 -
Sebi81g00122 277 SMART sant 35 75 IPR001005 -
Sebi81g00122 277 ProSiteProfiles Myb-like domain profile. 35 124 IPR001005 -
Sebi81g00122 277 FunFam MYB transcription factor 83 146 - -
Sebi81g00122 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 73 IPR017930 -
Sebi81g00122 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Sebi81g00122 277 SUPERFAMILY Homeodomain-like 34 120 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00122 Sebi-Chr81 1672853 1673901 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00122 29 276 MYB Transcription Factor Family AT2G47190 47.778 1.01e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi81g00122 Myb_DNA-binding 3.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00122 K09422 - gmx:778040 342.428