Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00119 ATGGATGTTAAGGTTAAGAAAGGTGAGTCTGCAACACGAACACACATGCAGAACAATGATAACGAGATAGGCATCAGAAAAGGCCCATGGACGTTAGACGAGGACACCATTCTCGTCAATTACATTACCACCCATGGTCTGAGGAGAAGTGGGAAGAGTTGCAGATTAAGGTGGCTAAACTACTTGCGTCCTGATGTTCGGCGTGGAAATATCACACTTGAAGAACAGATATTGATTCTTGAGCTCCATTCTCGGTGGGGAAATAGGTGGTCCAAGATTGCTCAGCACCTTCCTGGTAGAACAGACAATGAAATTAAAAACTATTGGAGGACCAGAGTTATAAAACAAGCGAAGCAACTAAAGTGTGATGTGAACAGCAAACAATTCAGAGACGCCTTGCGTTACGTGTGGATGCCTCGCTTGCTCGAGAGGGTTCAGCCAGCATCTCAATCTCAGAATCAACTGCTGGACCCAAACTTAAGTGCTGCAGGTGGGGTCCTAAACGGTTCATCAGATTCAGGAACAGAGTGGGCAAAACAGAACCACTCCTCGTCCTGTATCAGTGGTACTTGCTCAGACTCATCATCATCCGTGGAGTTCCAAGTTCCTTCAAATTCGGACCATATTGATTCTTCGGAACAGTTGGGTCCTAAAGGCTCGGATCTCTGGCCAAGCCAGATGTTAGAACAGGGGAACGGTGGTGACTCGTCAGAGAGTTTGTGGAATGATGACAGTGTATGGTTTTTGCAATTGCAACAGCTTTCTGATGACCTCGAAATAAAAAACAATTTCCTTGCGTGA 801 0.4569 MDVKVKKGESATRTHMQNNDNEIGIRKGPWTLDEDTILVNYITTHGLRRSGKSCRLRWLNYLRPDVRRGNITLEEQILILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDALRYVWMPRLLERVQPASQSQNQLLDPNLSAAGGVLNGSSDSGTEWAKQNHSSSCISGTCSDSSSSVEFQVPSNSDHIDSSEQLGPKGSDLWPSQMLEQGNGGDSSESLWNDDSVWFLQLQQLSDDLEIKNNFLA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00119 266 MobiDBLite consensus disorder prediction 1 22 - -
Sebi81g00119 266 Gene3D - 27 67 - -
Sebi81g00119 266 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Sebi81g00119 266 Pfam Myb-like DNA-binding domain 27 62 IPR001005 -
Sebi81g00119 266 MobiDBLite consensus disorder prediction 197 213 - -
Sebi81g00119 266 MobiDBLite consensus disorder prediction 225 239 - -
Sebi81g00119 266 SUPERFAMILY Homeodomain-like 24 109 IPR009057 -
Sebi81g00119 266 Gene3D - 72 113 - -
Sebi81g00119 266 FunFam MYB transcription factor 72 135 - -
Sebi81g00119 266 SMART sant 67 115 IPR001005 -
Sebi81g00119 266 SMART sant 26 64 IPR001005 -
Sebi81g00119 266 CDD SANT 72 111 IPR001005 -
Sebi81g00119 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Sebi81g00119 266 ProSiteProfiles Myb-like domain profile. 22 62 IPR001005 -
Sebi81g00119 266 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 24 208 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi81g00119 266 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Sebi81g00119 266 MobiDBLite consensus disorder prediction 197 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00119 Sebi-Chr81 1640682 1641811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00119 10 263 MYB Transcription Factor Family AT2G47190 45.161 2.28e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi81g00119 Myb_DNA-binding 2.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00119 K09422 - gmx:778065 289.271