Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00102 ATGGAAGCTAGATTTGGTGCAGAAGCTTATCATTTTTATGGTGTGGGTGCTTCCTCGGATTTGAGGGTTGTAGGGAAAAGGTCCTCAGAATGGGATTTGAATGATTGGAGATGGGATGGTGATCTGTTCATAGCTAGTCGGGTGAATCCAGTGCCAGCAGATGGTTTGGGAATGGGACAGCAAATTTTCCCTCTTGAGCCTGGGATCCCGGCCTCCAACAGCTCTTCTTCCTGCTCTGAGGAAGTAGATCCTTGGAATCCCAAGGGGAACAAGGAAGGGGAGAAAAAAAGGAGAGTTATTGTGCTGGAGGATGATGATTTGAATGAGGAAGCAGGTACCCTTAGTTTAAAGCTTGGTGGGCATGCTTCTCCAATGGTGGATAGGGAGATTGCGGGCTGGGATGGTATGAACGGTAAAAAAAGCAGAGTAGCTGGAGGTACTTCAAATCGAGCTGTTTGTCAGGTGGAGGACTGTGGTGCAGATCTGAGCAGGGCTAAGGATTATCACAGGCGTCATAAAGTTTGTGAGATGCACTCCAAAGCTAGTAGGGGCGCTTGTGGGCAATGCAATGCAGAGGTTCTGCCAACAATGTAG 594 0.4832 MEARFGAEAYHFYGVGASSDLRVVGKRSSEWDLNDWRWDGDLFIASRVNPVPADGLGMGQQIFPLEPGIPASNSSSSCSEEVDPWNPKGNKEGEKKRRVIVLEDDDLNEEAGTLSLKLGGHASPMVDREIAGWDGMNGKKSRVAGGTSNRAVCQVEDCGADLSRAKDYHRRHKVCEMHSKASRGACGQCNAEVLPTM 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00102 197 Pfam SBP domain 153 182 IPR004333 GO:0003677
Sebi81g00102 197 MobiDBLite consensus disorder prediction 70 92 - -
Sebi81g00102 197 SUPERFAMILY SBT domain 151 190 IPR036893 GO:0003677|GO:0005634
Sebi81g00102 197 ProSiteProfiles Zinc finger SBP-type profile. 150 197 IPR004333 GO:0003677
Sebi81g00102 197 Gene3D - 148 191 IPR036893 GO:0003677|GO:0005634
Sebi81g00102 197 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 74 183 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00102 Sebi-Chr81 1470490 1471083 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00102 1 187 SBP-box Gene Family AT3G60030 38.542 1.55e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sebi81g00102 SBP 3.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00102 - - gmx:100814273 319.316