Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00098 ATGTGTGAGACAACTGAAGATCCCAAGCTTTGTCATGATACACTTAGCACTGTTCCTGCCTCCAATGCCTCTGATCCAAAGGCTTATATAGCGGCAGCAGTGGAAGCAGGGGTCAACATTGTCATTAAGGCCTTCAACATGAGTGACAGGCTCTCAGTAGAGCATGGTGAAAAGAACAACACAGGTGGTCTCAAGATGGCTCTTGATGACTGTAAGGACTTAATGGAATTTGCTATGGACAGCATTGAGGCTGCAATTAATTTGGTTCGTGAAAGCAACATACAAGCAATTCATGACAGAACCCCTGACTTTAGGAACTGGTTGAGTGCTATTATCTCATACCAACAATCATGCATGGAAGGTTTTGATAAAGAGAAAGATGGTGAGGAACAGGTGAAGGAACAGTTGAATGAATCAAGTTTGGACACAATGGGGAAGCTCACTGCAATAGTCCTTGACATTGTCACTGATTTGGCTAAAATCCTTCAGAGCTTTAACTTGAAGTTGGATTTAAATCCTGCTTCTCGTCGTCTTCTGGAGGTTGATAGTGAAGGATACCCCACATGGTTCTCAGCTGCAGATCGCAGACTCTTAGCTAAGATGAAAGATGGAGAACAAGTAACACCAAATGCTGTGGTTGCCAAAGATGGAAGTGGTCAATTTAAAACCGTTAAGGATGCTATTGCCTCCTATCCACAGGGTTTCAAAGGCAGATACATTATCTATGTCAAGGCTGGAACCTATGATGAGTACATCACAGTTCCCAAAAAAACAGCTAACCTTCTTATCTATGGTGATGGCCCTACAAAAACCATTATCACTGGTCACAAAAACTATGTTGATGGTGTCAAGACAATGCAAACTGCCACCTTCGCTAACACTGCACCTGGATTCATTGCTAAGTCAATAGCATTTGAGAACACAGCTGGTGCAAGTAAGCATCAAGCAGTGGCGTTTAGAAACCAGGGAGATATGTCAGCTATGTTCGATTGTGCTTTTCATGCTTACCAGGACACTCTGTATGTTCATGCGAATCGTCAATTCTACCGCAACTGTGAAATCTCTGGAACCATTGATTTCATCTTCGGTGCATCAGCAACATTGATCCAGAATTCTAAAATCATTGTGAGGAAGCCAGGGGACAGTCAATTCAACACAGTGACAGCAGATGGTACAAAACAGAAGAACATGGCTACAGGGATTGTGCTCCAGAATTGTGAGATAGTGCCAGAGCAGGAGTTGTTCCCTGACAGGTTTCAAGTGAAATCGTACTTGGGAAGGCCATGGAAGCAATATGCTAGAACAGTGGTTATGGAGTCTAACATTGGTGACTTTATTCAACCAGAAGGGTGGCATGTTTGGGAAGGGGAACAGTTTCTTGACACATTGTACTATGCTGAGTATGCCAACGTTGGACCTGGTGCTGATGTTAAAGGAAGGGTCAAGTGGAAGGGTTACCACCCAAATATCAATAAGGATGAAGCTGCACAATTCACTGCTAGCCAATTCCTCAGAGGTGGACCTTCTGGGAAAGCTGAGGATTGGTTGCAAGCTACTGGCATTCCTTTCAATGCTGGCTTCATCAAGGGTAATTGA 1596 0.4361 MCETTEDPKLCHDTLSTVPASNASDPKAYIAAAVEAGVNIVIKAFNMSDRLSVEHGEKNNTGGLKMALDDCKDLMEFAMDSIEAAINLVRESNIQAIHDRTPDFRNWLSAIISYQQSCMEGFDKEKDGEEQVKEQLNESSLDTMGKLTAIVLDIVTDLAKILQSFNLKLDLNPASRRLLEVDSEGYPTWFSAADRRLLAKMKDGEQVTPNAVVAKDGSGQFKTVKDAIASYPQGFKGRYIIYVKAGTYDEYITVPKKTANLLIYGDGPTKTIITGHKNYVDGVKTMQTATFANTAPGFIAKSIAFENTAGASKHQAVAFRNQGDMSAMFDCAFHAYQDTLYVHANRQFYRNCEISGTIDFIFGASATLIQNSKIIVRKPGDSQFNTVTADGTKQKNMATGIVLQNCEIVPEQELFPDRFQVKSYLGRPWKQYARTVVMESNIGDFIQPEGWHVWEGEQFLDTLYYAEYANVGPGADVKGRVKWKGYHPNINKDEAAQFTASQFLRGGPSGKAEDWLQATGIPFNAGFIKGN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00098 531 PANTHER PECTINESTERASE 1 517 - -
Sebi81g00098 531 Pfam Plant invertase/pectin methylesterase inhibitor 1 154 IPR006501 GO:0004857
Sebi81g00098 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 159 IPR035513 -
Sebi81g00098 531 Pfam Pectinesterase 210 506 IPR000070 GO:0030599|GO:0042545
Sebi81g00098 531 NCBIfam pectinesterase inhibitor domain 1 155 IPR006501 GO:0004857
Sebi81g00098 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 158 IPR035513 -
Sebi81g00098 531 SMART PMEI_2 1 154 IPR006501 GO:0004857
Sebi81g00098 531 FunFam Pectinesterase 204 527 - -
Sebi81g00098 531 ProSitePatterns Pectinesterase signature 2. 354 363 IPR033131 -
Sebi81g00098 531 CDD PMEI-like_3 1 160 - -
Sebi81g00098 531 Gene3D - 204 527 IPR012334 -
Sebi81g00098 531 SUPERFAMILY Pectin lyase-like 208 525 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00098 Sebi-Chr81 1409870 1411815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00098 1 527 Carbohydrate Esterase AT2G26450 40.901 6.19e-135 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00098 K01051 - gmx:100789650 871.692