Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00097 ATGGAGAAGGCGTATATACGCGTTGTTGCTCTTGTCAGCACCAACCAAAACAGTGGCAGTACCGTCGATGAAACGGGCCAAGACAGCAGTGGGACGTTGAGCGCCCACACTAGGGCTGTCCAGGCCGTGTGCCAAGACAGCGATGACGAAAAGTTTTGCGTTGACACTCTCACAAGTGTCAATGCCACAGACCCAAAGGAATACGTTAAAACTGTGGTGAAAAACACCATGGAAGGCGTCATCAAAGCCTTCAACATGAGTGACAAATTCAATTTGCAAGAAATCAAGATCAACACCACTGGTATCAAAATGGCCCTTGATGATTGTAAGGACTTGTTACAATTCGCCATTGAAGAATTACAAGCCTCAAATATTCTAGTTAAGGACAACAACATTCACAGCGTCAGTGATCGTGCCTCAGAACTTAAAAACTGGCTAGGTGCTGTTGTTGCCTACCAACAATCATGCCTTGATGGATTCAACACCGACGCTGAAAAGGAGGTGAAGACACAGTTAAAAACGGATAGTTTGGATTACATGGGGAAGCTTACTGCGTTAGCACTTGATGTTGTGTCTGGGATCTCTAAGATTCTCGATGCAGTTGGCATGAGTTTGAATGTGAAACCTTCCTCTCGTCGCCTTCTTGATGTGGATCAAGATGGATATCCATCTTGGATGTCCGTTGCAGATCGTAGGCTCATGGCTGATGTGAAAGAAGGAGGTTCACTCCCACCTAATGCAGTTGTTGCCAAAGATGGCAGTGGCCAATATAAGACTGTTCAGGATGCTATTAACTCATACCCCAAAGGTCACAAAGGCAGATATGTTATCTACATTAAGGCCGGTATCTATCAAGAGTACATTACGGTTGACAAGAAAAAGCCTAATATTTTCATGTACGGTGATGGCCCTGCAAAAACCGTTATCACAGGTAACAGAAATTTCGTTGATGGTTGGAAGACAATGAGATCCGCTACCTTTTCAACCAAGGCTGAAGATTTCATTGCCAAGTCAATGGGATTTGAGAACAGTGCTGGAGCACATAAACACCAAGCAGTGGCACTTCACGTGCAAGGTGATCGCTCTGCTTTCTTCGATTGCGCAATAAGTGGTTATCAGGACACGTTGTATGTTCACGCTCACCGTCAATTCTACCGTAACTGTGAAATCTCTGGCACCATAGATTTCATTTTCGGTTATGCATCAACCTTGATCCAGAGCTCGAAGCTGATTGTGAGGAAGCCTGATCCTAATCAGCAAAACATAGTGGTAGCTGATGGGACGGCTGAAAAGAACATGCCAACTGGAGTTGTGATTCAGAATTGTGAGATTGTTCCAGAGGCAACCCTCCAACCAGATAGATTAACGGTGAGATCGTACTTGGCGAGGCCATGGAAGGCATATTCAAGGGCAATCTTCTTGGAAACTACCATTGGTGATCTCATTCAGCCTGATGGATATCTTCCATGGTCAGGGAATCAGTTCCTTGACACGTGTTATTTTGCTGAGTATGCTAACACTGGAGCTGGGGCTGATGCTCAGAAAAGAGTCAAGTGGGGCCGTGGACAGCTTACCAAAGAGGATGCTATGCAATACACTGCTGATCAATGGCTCCAAGCCAATACATGGTTGCCAGCCACTGGCATACCTTTTGATCTTGGCTTCACTAAAGCTTGA 1677 0.4532 MEKAYIRVVALVSTNQNSGSTVDETGQDSSGTLSAHTRAVQAVCQDSDDEKFCVDTLTSVNATDPKEYVKTVVKNTMEGVIKAFNMSDKFNLQEIKINTTGIKMALDDCKDLLQFAIEELQASNILVKDNNIHSVSDRASELKNWLGAVVAYQQSCLDGFNTDAEKEVKTQLKTDSLDYMGKLTALALDVVSGISKILDAVGMSLNVKPSSRRLLDVDQDGYPSWMSVADRRLMADVKEGGSLPPNAVVAKDGSGQYKTVQDAINSYPKGHKGRYVIYIKAGIYQEYITVDKKKPNIFMYGDGPAKTVITGNRNFVDGWKTMRSATFSTKAEDFIAKSMGFENSAGAHKHQAVALHVQGDRSAFFDCAISGYQDTLYVHAHRQFYRNCEISGTIDFIFGYASTLIQSSKLIVRKPDPNQQNIVVADGTAEKNMPTGVVIQNCEIVPEATLQPDRLTVRSYLARPWKAYSRAIFLETTIGDLIQPDGYLPWSGNQFLDTCYFAEYANTGAGADAQKRVKWGRGQLTKEDAMQYTADQWLQANTWLPATGIPFDLGFTKA 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00097 558 CDD PMEI-like_3 42 196 - -
Sebi81g00097 558 Gene3D - 241 555 IPR012334 -
Sebi81g00097 558 Pfam Plant invertase/pectin methylesterase inhibitor 39 188 IPR006501 GO:0004857
Sebi81g00097 558 Pfam Pectinesterase 246 540 IPR000070 GO:0030599|GO:0042545
Sebi81g00097 558 NCBIfam pectinesterase inhibitor domain 30 179 IPR006501 GO:0004857
Sebi81g00097 558 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 195 IPR035513 -
Sebi81g00097 558 SMART PMEI_2 35 190 IPR006501 GO:0004857
Sebi81g00097 558 FunFam Pectinesterase 241 555 - -
Sebi81g00097 558 FunFam Pectinesterase 36 195 - -
Sebi81g00097 558 ProSitePatterns Pectinesterase signature 2. 390 399 IPR033131 -
Sebi81g00097 558 PANTHER PECTINESTERASE 20 545 - -
Sebi81g00097 558 SUPERFAMILY Pectin lyase-like 244 553 IPR011050 -
Sebi81g00097 558 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00097 Sebi-Chr81 1402202 1404467 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00097 6 555 Carbohydrate Esterase AT3G05610 40.036 6.40e-137 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00097 K01051 - gmx:100820142 848.195