Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00094 ATGGCAGCCGCCAAACCAATTGCAGTAGCGGTTTCTCTCATTCTGGTAGTGGGTGTTGTGATCGGTGTTGTTACTGTCCAAAACAAGAGCCCAAAATCAACCAATGAAGGCGGAGAATTGAATACCCACAATAAGGCCGTATCTACCCTCTGCCAAGGCACTGACGACCAGAAACTCTGTCATGATGTCCTTAGCCCCATCAACACCACAGACCCAAAGGATTACGTGGCAGCTGTGGTGAAAACCTCCATGGAAAGCGTTATCAAAGCCTTCAACATGAGCGATAGGCTCACCGTGGAGCATGGAGACAACAACAATGGTGTTAAAATGGCACTTGAAGATTGCAAGGACTTATTGCAATCTGCCATTCAGGAACTCCAAGCCTCAGGTGTTTTGGTTCAGGAAAGCAGCCTTCAAGATATCAACCAACGCGCCGCTGAACTTAAAAACTGGTTAGGTGCTGTTGTTGCCTACCAACAATCTTGCCTTGATGGGTTCAACACAGACGGTGAGAAGGAGGTTCAAACCAAGTTACAATCGGGTAGCTTGGACAACGTTGGAAAACTCACTGGTTTGGCACTTGATATTGTGTCTGGTATCACTAAGATCCTTAGTGCTGTTGATTTGAATTTGGCTCTGAAACCTGCCTCTCGTCGTCTTCTTGAGGTCGATCATGAGGGTTACCCAACTTGGTTCTCTGCTTCTGATCGTAAACTCTTGGAGATGGTCAGCCAAGGAATGGGAGAATCAAATTCAGGCCACAGAAGTGGTGGAGGAATTATGCCCAATGCAGTTGTCGCTAAGGATGGTAGTGGTCAATTCAAAACTATTTTGGATGCTATTAACTCTTACCCCAAAAACCACCAAGGCAGGTTCATTATCTACGTCAAGGCTGGTATCTATAATGAGTACATTCTTGTTGACAAGAAGAAGCCCAACATTCTCTTGTACGGTGATGGCCCTACCAAGACCATTATCACTGGACGCAAAAACTTCCACGAAGGTGTTAAGACCATGAGAACCGCCACTTTCTCCACTGTTGCTGATGATTTCATTGCCAAGTCAATTTCATTTGAGAACACCGCTGGTCCTGAAGGTCACCAAGCAGTTGCACTCCGTGTGCAGGGTGATCGCTCTGCATTCTTCGATTGTGCTCTGCGTGGTTACCAAGACACCTTGTATGCCCATGCTCATCGTCAATACTACCGCAACTGTGAGATCTCTGGAACCATTGATTTCATCTTTGGCTACTCCACCACCTTGATCCAGAACTCCAAGATCATTATGAGGAAGCCTGGTCCAAACCAACAGAACATTGTGGTGGCTGATGGAACAGACCAGAAGAGCATGCCTACTGGAATTGTCCTTCAAAATTGTGAGATCATGCCATCTCCTGAACTCATGGCTGACAGGTTGACAGTCAAGTCTTACTTGGCAAGGCCATGGAAGGCATTCTCAAGGGCCGTCTTCATTGAAAATGTGATTGGTGATTTGATTCAGCCAGATGGATACATTCCTTGGAATCCAATTGAACCAAACACTCAGAATGCTTACTTTGCTGAGTTTGCCAACACTGGACCCGGTGCCAATGCTCAAGCAAGAGCTAAATGGGGAAAAGGTCTTATTAGCAAGGATGAAGCTGCTAGATTCACTGCTGAGCCTTGGCTCCAGGCTAGCACTTGGTTGCCTGCAACTGGCATTCCTTTTGATGCTACCTTCACCAAGGCTTAA 1731 0.4645 MAAAKPIAVAVSLILVVGVVIGVVTVQNKSPKSTNEGGELNTHNKAVSTLCQGTDDQKLCHDVLSPINTTDPKDYVAAVVKTSMESVIKAFNMSDRLTVEHGDNNNGVKMALEDCKDLLQSAIQELQASGVLVQESSLQDINQRAAELKNWLGAVVAYQQSCLDGFNTDGEKEVQTKLQSGSLDNVGKLTGLALDIVSGITKILSAVDLNLALKPASRRLLEVDHEGYPTWFSASDRKLLEMVSQGMGESNSGHRSGGGIMPNAVVAKDGSGQFKTILDAINSYPKNHQGRFIIYVKAGIYNEYILVDKKKPNILLYGDGPTKTIITGRKNFHEGVKTMRTATFSTVADDFIAKSISFENTAGPEGHQAVALRVQGDRSAFFDCALRGYQDTLYAHAHRQYYRNCEISGTIDFIFGYSTTLIQNSKIIMRKPGPNQQNIVVADGTDQKSMPTGIVLQNCEIMPSPELMADRLTVKSYLARPWKAFSRAVFIENVIGDLIQPDGYIPWNPIEPNTQNAYFAEFANTGPGANAQARAKWGKGLISKDEAARFTAEPWLQASTWLPATGIPFDATFTKA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00094 576 FunFam Pectinesterase 43 201 - -
Sebi81g00094 576 Pfam Pectinesterase 263 558 IPR000070 GO:0030599|GO:0042545
Sebi81g00094 576 NCBIfam pectinesterase inhibitor domain 31 196 IPR006501 GO:0004857
Sebi81g00094 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 201 IPR035513 -
Sebi81g00094 576 PANTHER PECTINESTERASE 15 563 - -
Sebi81g00094 576 Pfam Plant invertase/pectin methylesterase inhibitor 46 196 IPR006501 GO:0004857
Sebi81g00094 576 SUPERFAMILY Pectin lyase-like 263 571 IPR011050 -
Sebi81g00094 576 FunFam Pectinesterase 258 573 - -
Sebi81g00094 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 200 IPR035513 -
Sebi81g00094 576 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Sebi81g00094 576 Gene3D - 258 573 IPR012334 -
Sebi81g00094 576 CDD PMEI-like_3 49 202 - -
Sebi81g00094 576 SMART PMEI_2 42 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00094 Sebi-Chr81 1355990 1357892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00094 1 568 Carbohydrate Esterase AT3G62170 41.624 2.38e-141 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00094 K01051 - gmx:100808559 911.753