Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00080 ATGGATACTGAAGCGCGTCAAATTTTGCACGATGAGCAGACGAATGAGTGTCGTAATATTCACCCGTCTAGCCAGTCAAGGAAAATTTCTATAGGAGTTATGGCAGATTCAAAAGCTAGAACAAGATGTGGAGACATGAAAGGGGACGGGGCTGTCGTGCCAAATACAGAAAGGGTAATCTCTAATGTGGGAAATATCAATGGAGAAAAAAACAAAGATGAAGGAGTCACAGCTTCTTTTAATGTGAAGCAAATTGGAGGTCCAGAAGCGATGAGGTGTTCTTGGATCTCTAAATCCTTTCACCAAAGAACACCTACTTCTGAGGCCATCCTTCAAGTCAACAAAGCCTCTACTTTACTTGTCTCTCCTGGTGGGCGAGATGAGCCTGATGGAATAGAGTGTGCAGCTGAGAAACATTCAGTTCAGTTCTTCTCATATCAGTCTTTAAATTTTCCTTCTAATAACTACAAGAAGTTCGATGGGGATACCAGCAGAAGCTGCAGAAGGAAGGGAAGGGAGGACGGAACCACTGAAGAAAGGGCAGAGGAATTTACATTTACTACTGCACCAGAAGTCATAGAGTCTGATAAAACCAAGGCAGAAGACAAAATAAACAGAACGGAAAACAGAACCGAAAATTTGAGGATGAAGCTATGCCAAATATTGGGGGCCACCTCTTCCCCTAAGACTCAGCGCTCAGGTTCTCACAGTCGTAACGTGGACGAGGAAAGTTCGCCGCTCGAGCAGAGTTTGAACCAGAAGGAAAATAAATTTGTTAAGCCCATACAGAATTCGGATACTATAGAAACCGATTCAGAAAAGGCTGATCATGCTCATATAAGGCCAGTAACTCGTTCTTTGAGCAGAAAGAGAGCGTTTTCCCAAAAGCAACCGGGAAAAGGTAAAAGTGGCCCATCTTCTAAAGACCCAGAGAAGCATCCAGAAAAAAATATATTTTCTTTTGAAGAAAAATGGATTGAGGACCGAAATGCTTTTCCAAATGATGGTCCCTCAATGTCTATGAAGAAGAAAAAGAGTCAGGGAAAGAGTTCCAGAATTGGGCGACGTAAGATCTGCTTCAATGAAAATCATTCTGCAGATAAACTTCATCAAGACACTTTGAAGACTGATCTACCACTGCATGATGGGGCACCATTTTCACTTGGGAATAAAATGGGAGGATTTATTGGTTGCTTACCTGACTATCAGACAAAAAGCCCTCAGACACAGAAAATAAACCAAGAAAAAGAATTTTACCAGCCACCAACTGTAAACAATACAGATCAGAATGGAGAACTTGAGGTTTCAGAAAATGGAGACCAGCGAGAGTATATAAGTGATCCAGTTAAAGAGAATGGCGCCAAGTCACAAGATAATTTTCAAAGCCCTACATTTCAGCTCAGGACACCTATTTTAAGTTCTCCTAGCTCAACACCAAAAACAGACAAAAAGGCAAACGACGTCAGTAGTAGTCCAGCATCATCTGAAAGGAGATTTTCTCTGGGAACCATTCGTAATTTAAGGACTTTTCAGGCTTTGGAGCCAGACTCCAACGGGCTAAGGAAACAAAAACAGTCTTCTGGTAAGGAGAAGCTCAAGCATTCTATTCCCAAAAAAGACAAATCTTTTGAGAACGAAGAAAAAGAGCAGGATGGCTCATCTGATTCATCATCCGAAGAGAGGAACTTCCAAAGATCTCATCAAGGGACTGAAGAAGGTGATTGGATAGCTTCTGAACAGAATCAAGATGGATTTGTAAGGGCTGTTGAACTGTTTGCCTTGGAATTGGGCAAGCTTAAGAGCAAACTTAAATCGATGACTAGTCAGAAATCCTCAGAAATTTTGAAGTCTGTTGCTGAACACATACATCTACAGCTGCAGGATGTTCATTCCCAGATTCAAACAGACATAGGAAAGCTTACAAATCTCAGTAAATCAAAGAGAAAACGGCTAGAAACAAGATTTGAAGGGGATTTGTCTCCTTTCGTATCTTTTCTCACCTTTTCTTCCTCTAACAAAATTGTAGAGCAACAGAAAGAGTTGAGGTTAATATACGATAGATTCAAGGAAGAGGTTAATCTGCATCTACAGGATTGCAGAAGCACTGTTGAAGATCTTGAGGCAGATCAGATAGAGATAAAGGGAGCCCTGGAAAAGCAAAGAGTAGCACATAAGAAGCTTCTATCGCAAGTTGAAGAAGCAGTGGAGATCCAACTCAATGATGCTCAAAGGAAAATCACAGCCACCCAGGAGGCAAATGGCGAGGGGAAAACTGCTCCAACTGAAGCACGTTATAACTATGTGCTTGAAAGAGGTACTGGGGACTGGCTCTATCATTTTCGCTGTGTGGTGTTGCATCGTCCCCGTTTGCTGAGTCCAGCTGGATCGCTCTCGTCTATAAATTTCAAAGGACTGACGTTTTGGCAACGGTTCCCTGGAGCTCGCAAGGAAAATGGTCAAATTAATGTGCAAGGAGGTTCATTATCAGGTGTCACACCAAAGACTCACTCGTATTCAATAAACCCTTCCCAAGCAAATTATGAAGATGCCTGCATTGCAAAAAGTGCAAGGTTAAACACTGGAGGATCAGGACCTCATCATTCAGTTATTACAAGGAATAGTTACTTGTGCACATCTTCCACACAGCACTGCCTCTGTTCACCTCCGCTCAAGAAACCAAGAATAATGGATTCAAGCCAAACACCAGCAACAAACTCTCAGAATAAACAAGACTTGGGAAAGGTTCATTTCTCCAACACTTTAACACCAAACTGTGTCTCCTTTGTTTCAAGAAGTCAGGAAACACCTCCTGACGAACAGTCTGAAGCTGTTGGTCATTATGATAACCAAACCTCAAGCTCAGCAGGACTTAAAGCAAAGAGAAAAGTTGATACTAACTATTGTGATGAACAATCTTCTTCCCTATGCTCGCTTGCAGCCTCAAATAACATTGATACTTGTAGCAGCAAACATGATGATAACGATGACTCAACATATTTAAGCGATAATGATGAAGAACCAGATGAGAAGCTTGCTCAGGAGGGCACCAGAGTCAAGAGAAGGAGGAATGCAAACAGTCATAGTTTATATGAAAGGAAGCGAAGAAATAAGATCAACAAGAAGATGCGTATGTTGAAAGAGCTCATACCCAATTGCAATAAGATGGACAAGGCTTCAATGCTTGATGATGCCATCGAATATCTCAAGACCCTACAGCTTCAGTTACAGATTATGTCAATGGGTGCTGGGCTTTTTATGCCTTTTATGATGTTACCTACTGCCACTCATCCTATGATCAACACACCCCAATTGCCTCAGTTAATGGGCTTCAGGCCAGGCACAGGCATCTCTTTCAGCCTACCTCAGTTCCCTATTGCACCTTTCACTGACAACAGAGTTCGGATGTTTGGCCTCCCTAACCAGGTGCCATCCATGCCGATTTCTCATGCACCGTTCATTCCTATGGTTGGAAATCCTTCTACACAACCACTTCTGGCAGAAAACCAAGCTTCTTCCCAGTTAACAACTATAATGTCCTCAGTCCCCAACAACTCATATCTCAATGGAAAGGCTCAAACTCAACAAAGCAAGCACTGA 3597 0.4215 MDTEARQILHDEQTNECRNIHPSSQSRKISIGVMADSKARTRCGDMKGDGAVVPNTERVISNVGNINGEKNKDEGVTASFNVKQIGGPEAMRCSWISKSFHQRTPTSEAILQVNKASTLLVSPGGRDEPDGIECAAEKHSVQFFSYQSLNFPSNNYKKFDGDTSRSCRRKGREDGTTEERAEEFTFTTAPEVIESDKTKAEDKINRTENRTENLRMKLCQILGATSSPKTQRSGSHSRNVDEESSPLEQSLNQKENKFVKPIQNSDTIETDSEKADHAHIRPVTRSLSRKRAFSQKQPGKGKSGPSSKDPEKHPEKNIFSFEEKWIEDRNAFPNDGPSMSMKKKKSQGKSSRIGRRKICFNENHSADKLHQDTLKTDLPLHDGAPFSLGNKMGGFIGCLPDYQTKSPQTQKINQEKEFYQPPTVNNTDQNGELEVSENGDQREYISDPVKENGAKSQDNFQSPTFQLRTPILSSPSSTPKTDKKANDVSSSPASSERRFSLGTIRNLRTFQALEPDSNGLRKQKQSSGKEKLKHSIPKKDKSFENEEKEQDGSSDSSSEERNFQRSHQGTEEGDWIASEQNQDGFVRAVELFALELGKLKSKLKSMTSQKSSEILKSVAEHIHLQLQDVHSQIQTDIGKLTNLSKSKRKRLETRFEGDLSPFVSFLTFSSSNKIVEQQKELRLIYDRFKEEVNLHLQDCRSTVEDLEADQIEIKGALEKQRVAHKKLLSQVEEAVEIQLNDAQRKITATQEANGEGKTAPTEARYNYVLERGTGDWLYHFRCVVLHRPRLLSPAGSLSSINFKGLTFWQRFPGARKENGQINVQGGSLSGVTPKTHSYSINPSQANYEDACIAKSARLNTGGSGPHHSVITRNSYLCTSSTQHCLCSPPLKKPRIMDSSQTPATNSQNKQDLGKVHFSNTLTPNCVSFVSRSQETPPDEQSEAVGHYDNQTSSSAGLKAKRKVDTNYCDEQSSSLCSLAASNNIDTCSSKHDDNDDSTYLSDNDEEPDEKLAQEGTRVKRRRNANSHSLYERKRRNKINKKMRMLKELIPNCNKMDKASMLDDAIEYLKTLQLQLQIMSMGAGLFMPFMMLPTATHPMINTPQLPQLMGFRPGTGISFSLPQFPIAPFTDNRVRMFGLPNQVPSMPISHAPFIPMVGNPSTQPLLAENQASSQLTTIMSSVPNNSYLNGKAQTQQSKH 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00080 1198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1022 1071 IPR011598 GO:0046983
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 435 449 - -
Sebi81g00080 1198 Coils Coil 689 709 - -
Sebi81g00080 1198 Coils Coil 732 752 - -
Sebi81g00080 1198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1021 1082 IPR036638 GO:0046983
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 404 574 - -
Sebi81g00080 1198 SMART finulus 1028 1077 IPR011598 GO:0046983
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 929 959 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 244 266 - -
Sebi81g00080 1198 Coils Coil 197 217 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 929 962 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 986 1012 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 194 213 - -
Sebi81g00080 1198 CDD bHLH_AtPIF_like 1022 1084 IPR047265 -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 523 568 - -
Sebi81g00080 1198 Pfam Meiosis-specific protein ASY3-like 579 751 IPR046845 -
Sebi81g00080 1198 Pfam Meiosis-specific protein ASY3-like 18 566 IPR046845 -
Sebi81g00080 1198 Gene3D - 1012 1072 IPR036638 GO:0046983
Sebi81g00080 1198 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY3 1 574 IPR037731 GO:0051321
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 329 355 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 161 185 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 452 522 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 267 283 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 160 315 - -
Sebi81g00080 1198 MobiDBLite consensus disorder prediction 404 434 - -
Sebi81g00080 1198 Pfam Helix-loop-helix DNA-binding domain 1025 1072 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00080 Sebi-Chr81 1113078 1125249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00080 936 1145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46970 40.271 2.99e-32 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi81g00080 HLH 3.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00080 - - gmx:100783804 930.628