Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00078 ATGGGATATCTAATTAGTATTGCCATGGTAACTTTTGCTGTTTTGATTATATCAAAGATTTGGAAAATCTTTATGATTCTCTTTTGGAGGCCATATGCTGTGACTAGGCACTTTCGAAAGCAAGGAGTCATGGGGCCACCTTACTCCTTCGTTTCTGGCTCTCTCCCTGAAATCAAAACAATGATGAAGGATGCAAGGAAAAAGGTCATGGATAGTCACTCCCATGAATTTACTCAAAGGGTCCTTCCTCATCTCCATAAATGGTCCTCATTATATGGGAACACATTTCTGTATTGGTATGGAACACAAGCGAGGATTTGTATCCCTGATCCTGAGCTGGCGAAGGAGATTTTATCAAACAAGTTTGGTTTCTATGCAAAATCCAAGACAAGGCCTTCTATAAAAGCCATGATAGGAGAAGGGTTAGTGTTAGTCAATGGAGTGGAGTGGGTTAAGCGCAGAAGAATATTGAATCCAGCCTTCTCCATGGATAAACTTAAGGTTATGATCAGTAGGATGGCAGCATGTACCATTTCCATGGTGGACAAGTGGAAAAGTGAAGCTATTGAAGCCAAGACAATAGAGATGAATGAACATTTTCGACAGCTATCAGCAGATATCATCGCCCAAACTGCCTTCGGTACCAGTTTTCTCCAAGGAAGGGAGGCCTTTAATGCACAAACAGAGCTTCAGAAGTGTATTGTAGCTTCAAGTTCTGACATTTTCATTCCTGGCACCCAATATCTTCCTACTAAGTCAAATTTACATAAATGGAAGCTTGATAGGAAAATGAAGAAATCACTACAACTCATTATAGAGAGTAGATTGCACTCTCAATCAAGTGGTGGTGGTGGATCATCAGATTGCTCTTTTGGGGATGATCTACTAGGTATAATGATGGATACAGAAAACACAAATACTGGTCCTAAATTGAAGATGAAGGAGATCATGGAAGAATGCAAGACCTTTTTCTTTGCTGGTCATGAAACCACTTCAAACTTGCTTACTTGGACTGTCTTCTTGTTGAGTAATTCTTCACACAAAGAATGGCAAGAGAAACTCAGACAAGAGGTCTTGCAAAATTGTGGCATGGAAATTCCTGATGCAGATATGTTATCAAAGTTAAAATTGGTGACTTTTTCTAAGGTGAATATGGTATTGCTGGAAGCGTTAAGGTTATATTGTCCTGTGATAGAACTGATAAGAGAGGCTTCACAAGACATGAAATTGGGAAATTTGTTGATCCCAAAAGGAACATGTCTCACAATCCCAATCACAATGATTCACAGGAGCAAAGAATACTGGGGTGAAGATGCAAATGAGTTCAATCCACTGAGATTCATAAATGGAGTTTCTAAGGCTGCAAAGCACCCAAATGCTCTTCTTGCCTTTTCAGTGGGTCCAAGAAATTGCATTGGTCAAAATTTTGCTATGCTGGAAGCAAAGACAGTAATGGCTTTAATTCTGCAAAGGTTTTCTTTGTCCCTTTCCCCTGATTATGTACATGCACCTGCAAACAACCTCACTTTGCAGCCACAACATGGCCTTCCCATCATTGTAAAACCATTGCAATTATAA 1578 0.3973 MGYLISIAMVTFAVLIISKIWKIFMILFWRPYAVTRHFRKQGVMGPPYSFVSGSLPEIKTMMKDARKKVMDSHSHEFTQRVLPHLHKWSSLYGNTFLYWYGTQARICIPDPELAKEILSNKFGFYAKSKTRPSIKAMIGEGLVLVNGVEWVKRRRILNPAFSMDKLKVMISRMAACTISMVDKWKSEAIEAKTIEMNEHFRQLSADIIAQTAFGTSFLQGREAFNAQTELQKCIVASSSDIFIPGTQYLPTKSNLHKWKLDRKMKKSLQLIIESRLHSQSSGGGGSSDCSFGDDLLGIMMDTENTNTGPKLKMKEIMEECKTFFFAGHETTSNLLTWTVFLLSNSSHKEWQEKLRQEVLQNCGMEIPDADMLSKLKLVTFSKVNMVLLEALRLYCPVIELIREASQDMKLGNLLIPKGTCLTIPITMIHRSKEYWGEDANEFNPLRFINGVSKAAKHPNALLAFSVGPRNCIGQNFAMLEAKTVMALILQRFSLSLSPDYVHAPANNLTLQPQHGLPIIVKPLQL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00078 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Sebi81g00078 525 Gene3D Cytochrome P450 28 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 Pfam Cytochrome P450 84 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 SUPERFAMILY Cytochrome P450 76 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi81g00078 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 515 - -
Sebi81g00078 525 FunFam Cytochrome P450 734A1 28 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00078 Sebi-Chr81 1099482 1104725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00078 21 524 Cytochrome P450 AT2G46960 52.918 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00078 K20660 - aprc:113872106 818.15