Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00075 ATGGCATCTTCATTCTCAATGCAGATGGTGCAAAGTCAGAACCTACTTCCTCGTTTTCATCATGTCCAGGGAACCTTTAGCCAAGATGTATCAAAGGTTCATAGGCCACATGTGGTCTGTAGCAGTACCAAATCAAAGCTTGGTTACAGAGAGAAAGGATACGGTTACAAAGGAAGCTACTTCCATCAATTAATCAAAGATTTCATGTGTCAGGGAGGGGACTTCACTGAAGGAAATGGAACTGGAGGAGTCAGTATCTATGGTTCGTCATTTAAAGATGAGAGTTTTGCTTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCTGGTCCAAATACCAATGGTAGTCAATTTTTTATTTGCACTGTAAAGACTCCATGGTTAGACAATCGCCATGTTGTGTTTGGACATGTCATTGATGGAATGGATATTGTGAGGACACTTGAATCGCAGGAGACAAGCAAGTTAGATAATAGACCCCGGAAGCCATGCAAAATTGCTAATTCTGGAGAACTGCCTATAGATGGTTGA 537 0.4171 MASSFSMQMVQSQNLLPRFHHVQGTFSQDVSKVHRPHVVCSSTKSKLGYREKGYGYKGSYFHQLIKDFMCQGGDFTEGNGTGGVSIYGSSFKDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDIVRTLESQETSKLDNRPRKPCKIANSGELPIDG 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00075 178 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 22 174 - -
Sebi81g00075 178 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 53 171 IPR002130 GO:0000413|GO:0003755
Sebi81g00075 178 Gene3D - 25 177 IPR029000 -
Sebi81g00075 178 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 39 173 IPR002130 GO:0000413|GO:0003755
Sebi81g00075 178 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Sebi81g00075 178 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Sebi81g00075 178 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Sebi81g00075 178 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Sebi81g00075 178 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 26 174 - -
Sebi81g00075 178 MobiDBLite consensus disorder prediction 154 178 - -
Sebi81g00075 178 SUPERFAMILY Cyclophilin-like 50 174 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00075 Sebi-Chr81 997918 1000094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00075 51 168 U-box Gene Family AT5G67530 47.899 7.42e-25 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00075 K03768 - gmx:100785805 235.728