Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00073 ATGGGTAATGGTACTTCTCGTGTTGTTGGCTGTTTGGTGCCATTCAATGGCAAAAGTGGGGTTGATTTGGAGTTTTTAGAGCCATTCGATGAAGGGTTAGGCCATTCATTCTGTTATGTGAGGCCATCCATTTTTGAATCTCCTGCCATTAGCCCATCAAACTCTGAGAGGTTTACAGTTGATTCCAGTACCCTTGATTCTGAAACCTTGAGTGGATCCTTTAGGCATGATAGCATGGAAGATTCTACTGGCATACACAAGCCAGGTAAGAATTTTCCAGAAACCACATTCAAAACCATTTCAGGGGCTTCTGTTAGTGCTAATGTTTCCACTGCAAGGACTGGTAACCAGAGTGCATTGTTTGCTAGTGATGTCCTGGAACCTGCTGCATCATTTGAGGGAACTGCTTCATTTGCTGCAATCCCTCTGCAGCCCGTTCCACGTGGTTCTGGACCTTTGAATGGTTTCATGTCTGGACCTCTGGAGAGAGGTTTTGCCTCAGGTCCATTGGATAGAGGTGGTGGATTCATGTCTGGGCCAATAGAGAAGGGAGTCATGTCAGGTCCTCTTGATGCCACTGACAAGTCCAATTTTTCAGCACCCCTTGCACGCAGTCGTCGAAGGCCACGTCTACAACATCTCATGAGAAGTGTCAGTGGACCAATGAAGAACACTTTATCCCGGACCTTCTCTAAACATTCCATGGGTGGCAGTTGGATGCAAAGGTTATTCTTACACCCAGTGACTCAACTAGCCTGGCATTCCAAAGACACAAAGTTTCGACCAGAAGTCTCTAGGAACTGTATTGAAGTTGGACCATATGAAGCGGAGTATAAGCATACACACAATTTGCAGTGGGCTCAAGGCAAGGCTGGTGAAGACAGGGTTCATGTAGTGCTTTCGGAAGAACAAGGGTGGTTGTTTATTGGGATTTATGATGGTTTTAGTGGACCTGATGCACCTGATTTTCTGATGAGCCATCTTTATAGATTTATAGACAAGGAATTGGAAGGTTTACTTTGGGATTATGAAGATAAACCTGTAGATCCACTTAATCCTGAAGTCCCTGAAACTGTAAAAGCTGTGGTTGCTCCAGAATGCAGTAGGCAGGAATTGTCTAATATTCATACTAATTCAAATCAAGAAAGTTTAGAAGCTTCTTCTGGTCCTGTAATGATCAATGATCAATCATCTAACAGTGAGATAGTTGAGGAAAATGCTGAAGTTAAGGTGAATGTTGAACACCAGTTACCTAATTGTGGAAGTCCTAGTATCTCGTGTACTGTTCCACCTTCTGTTCAACTCGGACAGTTGACTGGAAAAGGTAGAAAAAGTTTGCGGCTTTATGAGCTACTTCAGATGGAATCTTGGGATGAACAAGGTTTTTGGTCAGTCTCAGAACAGTGTAAAGATTCTTCAGTTCCTAGGGAACCAACAGTAGATGGGCAGATGAGACCTTGCTCATCTAATGTGAAAGAAGATAGATCTAGACATCAGGATGAAGGTCCCACTACATCAGGAGAAAATGGAGGCACTAGGTTTGATTCAACCAACCAGGAGCCTGAAGCTGTTTTTTCTGTTTCAGGACAAAGGCAGAATTCAAGAAAGGAGGAAAGTTCTATTGATGAGAAAATATTGGAAGCCTCAGGACCAATTAGAAAATGTAAGTCTGGAGTAGATCATAATGCGGTTTTAAGAGCAATGGCCCGAGCTCTTGAAAAAACAGAAGAGGCATACATGGAAATGGTAGAGCATAATCTGGACAAAACTCCAGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGACCAAATGATCGTCATCCTAATCCAAGTTTTCTCAAGGATGATGTGAGGCATAAAAATCGATCTAGAGAGTCATTAGTACGCATGGAGTTAGATAGGATTTCAGAGGAGTCCCCAATTCACAACCAAAACAATCATGTTAACAAGATGAACAAAAACCGAGAGATATCCATTTGTAGATTAAAAATGAGAGCTCTTCAGCTTTCCACAGATCACTGTACAGGTGTTGAAGAGGAAGTTTTTAGAATAAGAGCAGAACACCCTGATGATAATCAAGCCATATTAAATGATCGAGTGAAAGGACATTTAAAAGTCACCAGAGCATTTGGTGCTGGGTTCTTGAAGAGGCCATCTTTTAACGAAGCTCTACTGGAGGTGTTTCAAGTTGATTATGTGGGCACTGCTCCTTACCTAAGTTGCACTCCTTCTGTTCTTCATCACCGACTTTCCTCAAGTGATCGGTTCTTGGTACTCTCCTCTGATGGGCTCTACCAATATTTCAGCAATGAAGAAGTTGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCTGATGGTGATCCTGCACAATACCTTATTGCTGAGCTTCTCTTTTGTGCTGCTAAAAAGAATGGTATGGACTTTCATGACTTGCTTGATATTCCTCATGGAGATCGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGAAGGCTTTGGAGATCATCAGGATAA 2604 0.4228 MGNGTSRVVGCLVPFNGKSGVDLEFLEPFDEGLGHSFCYVRPSIFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEDSTGIHKPGKNFPETTFKTISGASVSANVSTARTGNQSALFASDVLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARSRRRPRLQHLMRSVSGPMKNTLSRTFSKHSMGGSWMQRLFLHPVTQLAWHSKDTKFRPEVSRNCIEVGPYEAEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFIDKELEGLLWDYEDKPVDPLNPEVPETVKAVVAPECSRQELSNIHTNSNQESLEASSGPVMINDQSSNSEIVEENAEVKVNVEHQLPNCGSPSISCTVPPSVQLGQLTGKGRKSLRLYELLQMESWDEQGFWSVSEQCKDSSVPREPTVDGQMRPCSSNVKEDRSRHQDEGPTTSGENGGTRFDSTNQEPEAVFSVSGQRQNSRKEESSIDEKILEASGPIRKCKSGVDHNAVLRAMARALEKTEEAYMEMVEHNLDKTPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNPSFLKDDVRHKNRSRESLVRMELDRISEESPIHNQNNHVNKMNKNREISICRLKMRALQLSTDHCTGVEEEVFRIRAEHPDDNQAILNDRVKGHLKVTRAFGAGFLKRPSFNEALLEVFQVDYVGTAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPDGDPAQYLIAELLFCAAKKNGMDFHDLLDIPHGDRRKYHDDVSVMVVSLEGRLWRSSG 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00073 867 MobiDBLite consensus disorder prediction 488 502 - -
Sebi81g00073 867 CDD PP2Cc 564 858 IPR001932 -
Sebi81g00073 867 ProSiteProfiles PPM-type phosphatase domain profile. 277 858 IPR001932 -
Sebi81g00073 867 SMART PP2C_4 277 856 IPR001932 -
Sebi81g00073 867 Gene3D - 259 418 IPR036457 -
Sebi81g00073 867 MobiDBLite consensus disorder prediction 70 92 - -
Sebi81g00073 867 PANTHER PROTEIN PHOSPHATASE 2C 280 857 IPR015655 GO:0004722|GO:0006470
Sebi81g00073 867 Pfam Protein phosphatase 2C 523 629 IPR001932 -
Sebi81g00073 867 Pfam Protein phosphatase 2C 683 807 IPR001932 -
Sebi81g00073 867 MobiDBLite consensus disorder prediction 503 534 - -
Sebi81g00073 867 Gene3D - 494 863 IPR036457 -
Sebi81g00073 867 MobiDBLite consensus disorder prediction 469 541 - -
Sebi81g00073 867 SUPERFAMILY PP2C-like 289 859 IPR036457 -
Sebi81g00073 867 FunFam Protein phosphatase 2C 32 254 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00073 Sebi-Chr81 963459 969296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00073 1 867 PP2C-type Phosphatase Gene Family AT2G46920 62.126 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00073 - - pcin:129315875 1400.19