Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00022 ATGTCCGACGACAAAGGCACAGACCAATACGGTGTTCTCCTCTATTACAAGTACGCTGAGATTCCGAACCTCGACGACCTCTTCACATTCTACCACTCCAACTGCTCCTCCCTCGGCCTCCTTGGTCGTGTTCGCCTTTCTTCTCACGGCGTCAATGTCACCGTTGGCGGCAACTTATCCTCTCTGGAGAGACACATTGAAGCCGTGAAGGCAAACAATAGCTTATTTGAAGGCACTGATTTCAAGCTTGCAACTTGTCATCAGCCACTGAATGACCAGGTTGCCAAGGAGTGTGGATTCACTTCTCTCTCAATTCGGATCGTCGAGGAACTGGTTACTCTCAGTTCTCATCCACTATTAAAGTCACCAAAAATCTCAAATGCTGGAAGACATCTTTCTGCACTGGAGTTCCATTCTTCCATTCAGCATGCTAACAAGGAGAGTCCAGAAAACAGCCTGGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTTCAGGCACCAAATGTTGAAACTTTGGATCCACAAGTCAGGCAGTATAGTGATTTTTCCTCATGGATAGATGATAATGGTGAACAGTTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCGGCCTATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAAGCTCAGATGCTAATATTATTGGTACCTGCCTTATTTGTCACTGCTCATTTGATGATTACTCTTCACGCTGCCGATGTACTTGTTGCAGAATGCTTGTCTTGGTTTGTCATAGTTGTCAGGAAGGGGAACAAAGATGAATCTGCACAGTATGTTTGTGAGCTATGCCAAAAACAGGGCAAAGCTGTTAGGTCACAACAGTTAATTGAAAATGGTGAATCAAAACCATCAGTGCCAGGTCTTGAGTTCCATAATTTTTCTTCAGATACCATATTCTTGCCTCAAGTGCCTAAAGGAGATGATGCAAGGACCTCAAGAAAACTGAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCATCTGGTTTTAAGGGAAGAACAGCATCATTAGCCAAAAAACTCAAAAAATTTACTGAATTTGTTTTTATAGACGCACCTCATGAATTATCATTCATTTATCAAACCCCCATGTCAGGGCCCCATTTGGATTGTGCATCGTCATCATTGGCACCTAGTCCTCCTCCACCTTCGGAGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCGCCTAATTTTGATGGAAGTAATGATGTTGATTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGCTGGATATGATATTTCACTATCACACTTGATGAATGTGTTCTCCCAAGAAGGGCCATTTGATGGGATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGACTTTAAATTTGTAGTCTTGTGCTCAGGCTTTGCTCTCCATATGAAGGAAATGGAGTGTGGTCCTATCAAGTGCCCTTCTCTTCATATTTTCGGTAACGAACATGGTAAAGACAGACAGATAACCAACCAAGCAAGCAAGGACCTTGCTTCACTGTATGATGCCGGTTGTTCTGTAATCATTGAACATGATTGTGGTCATATAATTCCTACTCGGTCCCCATATATTGATGAGATCAAGGATTTCCTTAGGCTTTTTCTGTAA 1842 0.4229 MSDDKGTDQYGVLLYYKYAEIPNLDDLFTFYHSNCSSLGLLGRVRLSSHGVNVTVGGNLSSLERHIEAVKANNSLFEGTDFKLATCHQPLNDQVAKECGFTSLSIRIVEELVTLSSHPLLKSPKISNAGRHLSALEFHSSIQHANKESPENSLVLLDARNLYETRIGKFQAPNVETLDPQVRQYSDFSSWIDDNGEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFSKERILFLITGYQLEAQMLILLVPALFVTAHLMITLHAADVLVAECLSWFVIVVRKGNKDESAQYVCELCQKQGKAVRSQQLIENGESKPSVPGLEFHNFSSDTIFLPQVPKGDDARTSRKLRILCLHGFRQNASGFKGRTASLAKKLKKFTEFVFIDAPHELSFIYQTPMSGPHLDCASSSLAPSPPPPSENCKKKFAWFVAPNFDGSNDVDWKVADGPFDPLQYQQQTAGYDISLSHLMNVFSQEGPFDGILGFSQGAAMAALISAQQEKLKGKMDFKFVVLCSGFALHMKEMECGPIKCPSLHIFGNEHGKDRQITNQASKDLASLYDAGCSVIIEHDCGHIIPTRSPYIDEIKDFLRLFL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00022 613 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 151 243 IPR036873 -
Sebi81g00022 613 SUPERFAMILY alpha/beta-Hydrolases 366 610 IPR029058 -
Sebi81g00022 613 Gene3D alpha/beta hydrolase 367 613 IPR029058 -
Sebi81g00022 613 FunFam Rhodanese-like domain-containing protein 6 1 112 - -
Sebi81g00022 613 FunFam esterase OVCA2 isoform X6 367 613 - -
Sebi81g00022 613 CDD RHOD_YceA 129 242 - -
Sebi81g00022 613 SMART rhod_4 139 246 IPR001763 -
Sebi81g00022 613 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 249 IPR020936 -
Sebi81g00022 613 Gene3D - 121 261 IPR036873 -
Sebi81g00022 613 Pfam Serine hydrolase (FSH1) 369 604 IPR005645 -
Sebi81g00022 613 Gene3D - 2 112 - -
Sebi81g00022 613 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Sebi81g00022 613 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00022 Sebi-Chr81 292388 296915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00022 8 613 Sulfurtransferasese or Rhodanese AT1G09280 58.238 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00022 - - mtr:25484701 953.74