LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi81g00022	ATGTCCGACGACAAAGGCACAGACCAATACGGTGTTCTCCTCTATTACAAGTACGCTGAGATTCCGAACCTCGACGACCTCTTCACATTCTACCACTCCAACTGCTCCTCCCTCGGCCTCCTTGGTCGTGTTCGCCTTTCTTCTCACGGCGTCAATGTCACCGTTGGCGGCAACTTATCCTCTCTGGAGAGACACATTGAAGCCGTGAAGGCAAACAATAGCTTATTTGAAGGCACTGATTTCAAGCTTGCAACTTGTCATCAGCCACTGAATGACCAGGTTGCCAAGGAGTGTGGATTCACTTCTCTCTCAATTCGGATCGTCGAGGAACTGGTTACTCTCAGTTCTCATCCACTATTAAAGTCACCAAAAATCTCAAATGCTGGAAGACATCTTTCTGCACTGGAGTTCCATTCTTCCATTCAGCATGCTAACAAGGAGAGTCCAGAAAACAGCCTGGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTTCAGGCACCAAATGTTGAAACTTTGGATCCACAAGTCAGGCAGTATAGTGATTTTTCCTCATGGATAGATGATAATGGTGAACAGTTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCGGCCTATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAAGCTCAGATGCTAATATTATTGGTACCTGCCTTATTTGTCACTGCTCATTTGATGATTACTCTTCACGCTGCCGATGTACTTGTTGCAGAATGCTTGTCTTGGTTTGTCATAGTTGTCAGGAAGGGGAACAAAGATGAATCTGCACAGTATGTTTGTGAGCTATGCCAAAAACAGGGCAAAGCTGTTAGGTCACAACAGTTAATTGAAAATGGTGAATCAAAACCATCAGTGCCAGGTCTTGAGTTCCATAATTTTTCTTCAGATACCATATTCTTGCCTCAAGTGCCTAAAGGAGATGATGCAAGGACCTCAAGAAAACTGAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCATCTGGTTTTAAGGGAAGAACAGCATCATTAGCCAAAAAACTCAAAAAATTTACTGAATTTGTTTTTATAGACGCACCTCATGAATTATCATTCATTTATCAAACCCCCATGTCAGGGCCCCATTTGGATTGTGCATCGTCATCATTGGCACCTAGTCCTCCTCCACCTTCGGAGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCGCCTAATTTTGATGGAAGTAATGATGTTGATTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGCTGGATATGATATTTCACTATCACACTTGATGAATGTGTTCTCCCAAGAAGGGCCATTTGATGGGATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGACTTTAAATTTGTAGTCTTGTGCTCAGGCTTTGCTCTCCATATGAAGGAAATGGAGTGTGGTCCTATCAAGTGCCCTTCTCTTCATATTTTCGGTAACGAACATGGTAAAGACAGACAGATAACCAACCAAGCAAGCAAGGACCTTGCTTCACTGTATGATGCCGGTTGTTCTGTAATCATTGAACATGATTGTGGTCATATAATTCCTACTCGGTCCCCATATATTGATGAGATCAAGGATTTCCTTAGGCTTTTTCTGTAA	1842	0.4229	MSDDKGTDQYGVLLYYKYAEIPNLDDLFTFYHSNCSSLGLLGRVRLSSHGVNVTVGGNLSSLERHIEAVKANNSLFEGTDFKLATCHQPLNDQVAKECGFTSLSIRIVEELVTLSSHPLLKSPKISNAGRHLSALEFHSSIQHANKESPENSLVLLDARNLYETRIGKFQAPNVETLDPQVRQYSDFSSWIDDNGEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFSKERILFLITGYQLEAQMLILLVPALFVTAHLMITLHAADVLVAECLSWFVIVVRKGNKDESAQYVCELCQKQGKAVRSQQLIENGESKPSVPGLEFHNFSSDTIFLPQVPKGDDARTSRKLRILCLHGFRQNASGFKGRTASLAKKLKKFTEFVFIDAPHELSFIYQTPMSGPHLDCASSSLAPSPPPPSENCKKKFAWFVAPNFDGSNDVDWKVADGPFDPLQYQQQTAGYDISLSHLMNVFSQEGPFDGILGFSQGAAMAALISAQQEKLKGKMDFKFVVLCSGFALHMKEMECGPIKCPSLHIFGNEHGKDRQITNQASKDLASLYDAGCSVIIEHDCGHIIPTRSPYIDEIKDFLRLFL	613

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi81g00022	613	SUPERFAMILY	Rhodanese/Cell cycle control phosphatase	151	243	IPR036873	-
	Sebi81g00022	613	SUPERFAMILY	alpha/beta-Hydrolases	366	610	IPR029058	-
	Sebi81g00022	613	Gene3D	alpha/beta hydrolase	367	613	IPR029058	-
	Sebi81g00022	613	FunFam	Rhodanese-like domain-containing protein 6	1	112	-	-
	Sebi81g00022	613	FunFam	esterase OVCA2 isoform X6	367	613	-	-
	Sebi81g00022	613	CDD	RHOD_YceA	129	242	-	-
	Sebi81g00022	613	SMART	rhod_4	139	246	IPR001763	-
	Sebi81g00022	613	PANTHER	THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2	4	249	IPR020936	-
	Sebi81g00022	613	Gene3D	-	121	261	IPR036873	-
	Sebi81g00022	613	Pfam	Serine hydrolase (FSH1)	369	604	IPR005645	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi81g00022	Sebi-Chr81	292388	296915	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi81g00022	8	613	Sulfurtransferasese or Rhodanese	AT1G09280	58.238	0.0	686

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi81g00022	-		-	mtr:25484701	953.74

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