Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00020 ATGGAATCATTCGAACCACACATAGGTTCCAGTAATTCAGACACGTTGCAAGAATCCAATCACAATAAGCGCCGGAAAATCGGAGACCGCGACGCCGGCGATCAAAATTCCCTCAATCTCATGCCGTGGAGATCCGACACCGAGCAGCAGATCTACTCCCGCAAGCTCGTCGAAGCTCTCCGCCGGATTCCTTCCCCGGCGGCGACCAAGCCTAGAGCCGCCGGTCAAGTCCGGGAAACCGCCGACCGAGTCCTCGCCGCCACCGCCAAGGGAAGAACGCGGTGGAGCCGCGCGATTCTCGGCCGGTGGAAGAAGCTCCAGAGGCAGCAGCACAAGAAAGTGAAAAAAGCCGGCACCGCTGCCGGATTGAAGAGACGACCGGGAATCGGCGGCGAGAGGAGGCGGCGGTTACCGGCCGTTCAGAAGAAAGCGCGCGTTCTCAGCCGGTTGGTTCCTGGTTGCCGGAAGCTTTCGTTCCCGAACCTTCTGGAAGAAGCCACCGACTATATCTCCGCCTTGGAGATGCAAGTGCGAGCGATGACGACTCTCGCCGAGCTACTCGCCGGTGGCTCGCCGGCTGGACTCGCTGGTCACGTGTTGAGTTGA 606 0.6023 MESFEPHIGSSNSDTLQESNHNKRRKIGDRDAGDQNSLNLMPWRSDTEQQIYSRKLVEALRRIPSPAATKPRAAGQVRETADRVLAATAKGRTRWSRAILGRWKKLQRQQHKKVKKAGTAAGLKRRPGIGGERRRRLPAVQKKARVLSRLVPGCRKLSFPNLLEEATDYISALEMQVRAMTTLAELLAGGSPAGLAGHVLS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00020 201 MobiDBLite consensus disorder prediction 1 42 - -
Sebi81g00020 201 MobiDBLite consensus disorder prediction 112 135 - -
Sebi81g00020 201 MobiDBLite consensus disorder prediction 1 17 - -
Sebi81g00020 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 187 IPR044660 GO:0006355
Sebi81g00020 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 189 IPR036638 GO:0046983
Sebi81g00020 201 MobiDBLite consensus disorder prediction 18 32 - -
Sebi81g00020 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Sebi81g00020 201 CDD bHLH_AtIBH1_like 129 184 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00020 Sebi-Chr81 250710 251315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00020 1 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.330 6.29e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00020 - - gmx:100783462 280.026