Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi819g00003 ATGGATGATATATTGGACTGGATGACTGGAAAAGACATACCAATGATGGATAGGGACACGCCATTTTGGCAGGAGGGTACAGATGAGCAATCGTTCATTTATGCTAGTCCTTCCTTGGTTGATCAAGAAGGTATTGATGTTTTCTTAGTGGGTGAAGGAGACAATTATGTGGTATTAGTTGATGCTGATTGGGATGACAACCAAAATGAAGAAGATCACCAGAATGAAGGATATATTGAACATGAAGAAGAAGCCCAACATGAAGAAGATCACCAGAATGAAGGATATACTGAACATGAAGAAGATCAAGATACTGAACAACAGGAAGAAAACCAGAATGAAGAAGAATCCCAACATGAAGAAGATCAAGATACTGAACATGTTGTCATAAGTAGGATTGATAGTTTCGAGGACATAAAAAAAATTGACCTCGTAAGATTCAGCCCACATGATGACTTTGCTAGTTTGGATGTAGCATACTTGTTCTATTCTTGGTATGGCAGAATGAACGGATTTTCAACCAAAAGAGGGAAAATTATCTCTAGTAGGAAAACTGGGAGGGTTTTGCAACAAAATTTGTTTTGCAACAAAGAAGGTAAACGTGTAGACAGTGGTTTGCCTATGGAAGAACGTCAACGTGAGCCCAAAGCTGAGACTAGATGTTATTGTAGGGCAGAATTTCGAGCGCATGTGGACATCAACTCAGGACGGTGGTATTGTTCTTATTTTTCTGATAAGCACAACCTAGAACTCTTAGATGCAATGTTTTGTGCAATGCTTCCTGCACACAGGAAGATGGTTGTTTGTGATATAGATCAGATGAATAACATGTTGAAGGTTGGCATTGGTCCACCCCAAATTTTTGGGTCATTTGCCAATTGCTCAAGAGGTTATGAAAAAATTGGATTCCGGAAAAAAGATATCTACAATCAAATTATCAAACAACGGCGGTTGCAAAATTCGGATGCAGAAGCAGCTGTAAACCAACTTGATTACAAAGTCTTTGGTGATGTACTGGCGTTTGATGCAACTTACCGTAAGAATAAGTATAGACTACCTCTAGTTGTTTTTTCCGGTGTGAATCACCATAATCGTACAACCATATTTGCCAGTGCAATAGTTGCCAATGAAACTGAGGAAACATACATTTGGCTACTGCGTCTGTTTTTAGAAGCAATGAAAGGTAAAATGCCTAACTCAGTCATAACTGATGGAGACCTTGCAATGAGGAATGCCATTAGAGTTGTGTTTCCAAGAGCTCATCACCGTTTGTGTGCTTGGCATCTAGCTCGTAATGCGACCTCTAATGTTGGAATCTCTTCCTTCATAAAAGGATTTGAACATTGCTTCAGGACAACATCAAGGTGTGAAGGTTTGCACTCAGAGTTAGCAAAATTTGTCCACTCCCGTCATAATCTAACAGATTTCTTACATCACCATAATCGATGTGTTGAGCATATGCGGTTCGGAGAAATGGAAGATGACTTTTCCTCCATACATGGTGATCCAGTATTGCAAACCAATCTTCAAGGTCTTGAAAGGTCAGCTGCCAATCTTTTAACTAGGAAATTGTTCTTTCTATTTCGTCCAGTGCTTCAAAAGGAAACTAGTATGAATGTTGTAGCATGTAGAGACTTGTACTCATACTCCTTATACACGGTGTGCAAGCGTGGTGGGGGGGCCAAGGCATGGAATGTGTCATATAATCCATCCAGTAATGAATTTAAGTGCCCATGCATGTGGTTAGAGTCACGTGGGTTACCATGTGTACACACAATTGCTGTGTTGGACCATCTAAACATCAATGAGCTCCCAAAAAGTTTGGTCCTAAAAAGATGGACTAAAGGAGCAAAGGACAATATTACTAGTTACAACAATGACAGTGGTACTTGGGACTCACAAAGGATTTTTAGACGTGATGCTCTAAATGATGTATACAAAAAGCTGTCTGTTGTGAATTCTGAAACTATTGAGGATTTTAATGATGTGATGGAAAGGTCTTTAAAAGAACATGCAGAAAAAATGACAAAGAGGGCATGTGATATGGCTGGTGGGAGTGAACCGACGTTAAGTGATCATGAAAGATTGAGGAACCCTCTCTCCGCAAGGCACAAAGAATGCGCGAGAGCAAGCACTTCCACTGGAGGATTGAGGGTTAGGCGCACAACCAAGTGCTCCATTTGTCACGTGGCTGGCCATAATAAGGCTACATGCCCACAATGA 2223 0.404 MDDILDWMTGKDIPMMDRDTPFWQEGTDEQSFIYASPSLVDQEGIDVFLVGEGDNYVVLVDADWDDNQNEEDHQNEGYIEHEEEAQHEEDHQNEGYTEHEEDQDTEQQEENQNEEESQHEEDQDTEHVVISRIDSFEDIKKIDLVRFSPHDDFASLDVAYLFYSWYGRMNGFSTKRGKIISSRKTGRVLQQNLFCNKEGKRVDSGLPMEERQREPKAETRCYCRAEFRAHVDINSGRWYCSYFSDKHNLELLDAMFCAMLPAHRKMVVCDIDQMNNMLKVGIGPPQIFGSFANCSRGYEKIGFRKKDIYNQIIKQRRLQNSDAEAAVNQLDYKVFGDVLAFDATYRKNKYRLPLVVFSGVNHHNRTTIFASAIVANETEETYIWLLRLFLEAMKGKMPNSVITDGDLAMRNAIRVVFPRAHHRLCAWHLARNATSNVGISSFIKGFEHCFRTTSRCEGLHSELAKFVHSRHNLTDFLHHHNRCVEHMRFGEMEDDFSSIHGDPVLQTNLQGLERSAANLLTRKLFFLFRPVLQKETSMNVVACRDLYSYSLYTVCKRGGGAKAWNVSYNPSSNEFKCPCMWLESRGLPCVHTIAVLDHLNINELPKSLVLKRWTKGAKDNITSYNNDSGTWDSQRIFRRDALNDVYKKLSVVNSETIEDFNDVMERSLKEHAEKMTKRACDMAGGSEPTLSDHERLRNPLSARHKECARASTSTGGLRVRRTTKCSICHVAGHNKATCPQ 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi819g00003 740 MobiDBLite consensus disorder prediction 83 98 - -
Sebi819g00003 740 Pfam MULE transposase domain 338 432 IPR018289 -
Sebi819g00003 740 ProSiteProfiles Zinc finger SWIM-type profile. 564 600 IPR007527 GO:0008270
Sebi819g00003 740 Pfam FAR1 DNA-binding domain 162 252 IPR004330 -
Sebi819g00003 740 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 149 665 IPR031052 GO:0006355
Sebi819g00003 740 MobiDBLite consensus disorder prediction 682 713 - -
Sebi819g00003 740 MobiDBLite consensus disorder prediction 83 127 - -
Sebi819g00003 740 MobiDBLite consensus disorder prediction 688 704 - -
Sebi819g00003 740 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi819g00003 Sebi-Chr819 154899 157377 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi819g00003 MULE 4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi819g00003 - - tpra:123913749 597.045