Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi818g00011 ATGGCTGCTCGAATTCTTTCCTCTCTGCACTATGTCTCTTCTTCTGCTTCAGCTTCCAAACGTTGTTTTGGCCTATACTGTGGTTGGCATAGAAGAATCAGTGGAATTGGTGCTTCTGCTGCTGCTGATGTGGAGCCTAGCATACCACCTGTGCAAATTGATCACAATCAGCTTCTGATTAATGGAGAATTTGTGGATGCAGCTTCTGGAAAAACTTTTCCAACCTATGATCCTAGGACAGGAGATTTAATTGCCAATGTTGCTGAAGGTGACAGGGAAGATGTAAATCGTGCTGTCCATGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGCATAATTTTAAGGTTTGCTGATTTATTGGAAAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGCCTTATGAACAGGCTGCAAATGTTGAGATACCTATGGTTGTACGTGTGTTTCGGTATTATGCAGGTTGGGCGGATAAAATTCATGGTCTAACAGTCCCAGGTGATGGACCACACCATGTTCAAACCTTGCATGAGCCTATTGGTGTAGCAGGGCAGATTGTTCCTTGGAACTTCCCACTTCTTATTTATTCATGGAAGGTTGCACCTGCATTAGCATGTGGCAATACAGTTGTGTTGAAAACTGCAGAACAGACACCTCTTTCTGCCCTTTATGTGTCAAAGCTATTTCTTGAGGCAGGACTTCCTCCTGGTGTTCTAAATATTATCACTGGCTATGGTCCAACTGCTGGTGCAGCTCTGTGCAGTCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCACTGGCACTGGTAAGATTGTACTAGGACTATCTGCACAAAGCAATCTGAAGCCAGTAACTCTGGAGTTGGGTGGAAAATCTCCTTTCATTGTGTGCAAGGATGCTGATGTTGATGTGGCTGTTGAGGCTGCACACTCTGCCTTATTCTTTAATCAGGGTCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGTATTTGTGGAAAAGGCTAAGGCCCGTGCCCTTAAACGTGTGGTTGGAGACCCTTTCAAAATTGGGGTTGAGCAAGGTCCTCAGATTGATTCTACACAATTTGAGAAGATCCTGAAATACATAAGATCAGGCATTGAAGGTGGTGCTACACTTGAATCTGGTGGTCAAAGAGTTGGCTCCAAAGGCTACTACATCCAACCCACTGTTTTCTCAAATGTTCAGGACAACATGTTGATAGCAAAAGATGAGATCTTTGGTCCAGTACAATCTATCTTAAAATTCAAGGATCTAGAGGAGGTGATACAAAGGGCCAATGCAACTTCCTATGGCCTGGCTGCTGGAGTTTTTACTCAGAATATGGACACTGCTAACACCTTGATGCGTGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATGTCTTTGATGCAGCAATACCTTTTGGTGGATATAAGATGAGTGGGCAAGGGAGAGTAAGGGGAATCTACAGCCTTAGCAGCTATCTTCAAGTTAAAGCCGCTGTCACTGCTTTGAAGAATCCAGCATGGCTGTAG 1611 0.4389 MAARILSSLHYVSSSASASKRCFGLYCGWHRRISGIGASAAADVEPSIPPVQIDHNQLLINGEFVDAASGKTFPTYDPRTGDLIANVAEGDREDVNRAVHAARKAFDEGPWPKMTAYERSRIILRFADLLEKHNDEVAAIETWDSGKPYEQAANVEIPMVVRVFRYYAGWADKIHGLTVPGDGPHHVQTLHEPIGVAGQIVPWNFPLLIYSWKVAPALACGNTVVLKTAEQTPLSALYVSKLFLEAGLPPGVLNIITGYGPTAGAALCSHMDVDKLAFTGSTGTGKIVLGLSAQSNLKPVTLELGGKSPFIVCKDADVDVAVEAAHSALFFNQGQCCCAGSRTFVHESIYDVFVEKAKARALKRVVGDPFKIGVEQGPQIDSTQFEKILKYIRSGIEGGATLESGGQRVGSKGYYIQPTVFSNVQDNMLIAKDEIFGPVQSILKFKDLEEVIQRANATSYGLAAGVFTQNMDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLSSYLQVKAAVTALKNPAWL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi818g00011 536 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 44 525 - -
Sebi818g00011 536 SUPERFAMILY ALDH-like 53 528 IPR016161 GO:0016491
Sebi818g00011 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Sebi818g00011 536 FunFam Mitochondrial aldehyde dehydrogenase 2 308 497 - -
Sebi818g00011 536 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 60 315 - -
Sebi818g00011 536 Pfam Aldehyde dehydrogenase family 64 525 IPR015590 GO:0016491
Sebi818g00011 536 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
Sebi818g00011 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 495 IPR016163 GO:0016620
Sebi818g00011 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 60 524 IPR016162 GO:0016491
Sebi818g00011 536 CDD ALDH_F2BC 53 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi818g00011 Sebi-Chr818 76444 79617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi818g00011 1 536 Aldehyde Dehydrogenase Gene Family AT3G48000 73.567 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi818g00011 K00128 - gmx:100798892 967.992