Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi818g00008 ATGAAGTTTGCAACTTCCTTGGCTCTAGAGGCAGGATGCAGCCTTAGAATTCATCTTTCACCCTTGTTGAATGATTCAAGTTGTGGAGCAGCATTTGATGCTTACCTCTATGCACTTGGTCATCGGGCAAATCAAACAGGGAAGGTTTTCTTGGATTCTACTGAGCAAAGAAATTGTCTGTTTATAAAGAGTTTTAAAGATAATACTATTTTTGGTTGTGGAATTGAGAACCTAACAAGTGGTGCTGGTGGATGTTCTGACTTCTTGGTTGCTGATGTTAGGAATAAATTAGGAAATGAACTTAGAAGTTTGGATGAAAACTGTAAACTTAACACTTCAGGTAACAAGTGGGAACAATCATGTCCTTCCTGCTTGAGAACCTGGAAAACCATAGGAGGGATAGATTCCAGAAAGACCAACATCCAAGCTGAAAAAACTGAAGCTGATCTTTGTAGAATTGCTGTACTTGTGACATTGATAAGCAGAAAAATTGAAAATGAGATATATGTCCACACAGTTCTGAGATGCCTGGGAAAACAACATATTTATGCAGCTGAAAATCAAACCACAGAAGGCAATCAGAAGATGAAGAGTGATAGAGATGATACTACAGGTATGTGGATTCTGATTGGAGCAATAGTAGGGGTTATTCTGTTAATAGTTATCACTGTATACATCATGCTTCGTAGATATTTCAGATCAGCCCCACCAAAAAACAAAGTAACATTTGGAGACATGTTAAAGAAAACTGCTTGTCCAATAGTTTCTATCAAGGAAGTGTATGCTGCCACTAACCATCTGAATGGAATGAATATCATTGGGGAAGGAACTGCAGGTAAGGTCTACAAAGGCACAATGAAAAATAAACAGGAGGTTGCAGTAAAGCACATAATCAATGATGATGGAAATATGGAAACTTTTGTCAGAGAAGTTACAAGCCTATCTCATGTCAGGCACCCAAATCTTGTTACTTTGCTGGGTTGCTGTGTTGAGGGAGATGAATGTTTTATTGTCTATGAGCTATGTCCCAATGGGAGTCTTTCTGAGTGGCTATTTGGGAAGAACAAGGTGTTGTCCTGGACACAGAGACTAGAAATTGCAATTGATAGTGCTCGAGGTCTTTGGTTTTTACACTCATATCCTGGAGGCTGCATCGTTCACCGTGATATCAAGCCAACAAATATTCTTCTTGGGTCTAAATTTGAGGCAAAGCTATCAGATTTTGGACTGTCTAAAGTTATTGAGGTGGGTGAAACGTATGTTAGTTCAGAAGTGAGAGGAACTTTTGGATATGTGGATCCTGAGTACCAAAGCAATCACCGTGTGAATTCATCAGGTGATGTTTACAGCTTTGGCATGGTACTTCTACAAATCCTCTCTGGAAAGAAGGTCATAAATTTGAAACTGAAGAAACCAATGTCACTGAGTAAAATGGCAAAAGCACTCACCAGGGATGGCAGCATTACAGAATTTGCTGATCCTAAACTTCAAGGAGATTACTCTGAGGAAGCATTTGATTTTACACTTAAGCTGGCTCTGTCATGCACATCACTCAACCAACATCGTCCGTCCATGGAGCAGGTTCTTAAAAAACTGGAAGAGGCCTTATTAATTTCAAAAGGGTGGAAGGTTTCTACTACAGAAACTCCAGAAGACAATGTTTGA 1665 0.394 MKFATSLALEAGCSLRIHLSPLLNDSSCGAAFDAYLYALGHRANQTGKVFLDSTEQRNCLFIKSFKDNTIFGCGIENLTSGAGGCSDFLVADVRNKLGNELRSLDENCKLNTSGNKWEQSCPSCLRTWKTIGGIDSRKTNIQAEKTEADLCRIAVLVTLISRKIENEIYVHTVLRCLGKQHIYAAENQTTEGNQKMKSDRDDTTGMWILIGAIVGVILLIVITVYIMLRRYFRSAPPKNKVTFGDMLKKTACPIVSIKEVYAATNHLNGMNIIGEGTAGKVYKGTMKNKQEVAVKHIINDDGNMETFVREVTSLSHVRHPNLVTLLGCCVEGDECFIVYELCPNGSLSEWLFGKNKVLSWTQRLEIAIDSARGLWFLHSYPGGCIVHRDIKPTNILLGSKFEAKLSDFGLSKVIEVGETYVSSEVRGTFGYVDPEYQSNHRVNSSGDVYSFGMVLLQILSGKKVINLKLKKPMSLSKMAKALTRDGSITEFADPKLQGDYSEEAFDFTLKLALSCTSLNQHRPSMEQVLKKLEEALLISKGWKVSTTETPEDNV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi818g00008 554 Gene3D Transferase(Phosphotransferase) domain 1 342 544 - -
Sebi818g00008 554 Gene3D Phosphorylase Kinase; domain 1 233 341 - -
Sebi818g00008 554 FunFam probable receptor-like protein kinase At5g59700 342 550 - -
Sebi818g00008 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Sebi818g00008 554 SUPERFAMILY Protein kinase-like (PK-like) 249 532 IPR011009 -
Sebi818g00008 554 Pfam SPARK 23 141 IPR043891 -
Sebi818g00008 554 ProSiteProfiles Protein kinase domain profile. 267 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi818g00008 554 SMART serkin_6 267 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi818g00008 554 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 95 534 - -
Sebi818g00008 554 Pfam Protein kinase domain 271 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi818g00008 Sebi-Chr818 70226 72815 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi818g00008 256 533 Receptor kinase-like Gene Family AT1G07650 41.958 1.49e-59 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Sebi818g00008 Pkinase 4.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi818g00008 - - aprc:113867593 847.81