Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi818g00004 ATGGAAACTAATGGCATGGACGGTTCACGGGAGGAGAATGGATTTGAGGAAGAGGAGGCTGACCAATATAGGATTGACAATATTGCAGATTTGAATGGGGTTAATTTTATTGGTTTAACAAATGAGGAGGTAAAGCTCTACCACTTTTTGAATCGTAATGTGGAATTTCAATTCTACAATAAGTTTGCTCTTAAAAGGGAATTTGCGGCTCGTAGATGGAATGTTCTAAAAAATAAGAGAGGAGAGACTACTCAACAAGCTTTTATGTGTTTCAAGGAGGGTTTTCGTGACAAGAAATACTTAGAGAGGGAGGATAGAAAGCAGGAGCCTAGAGCAATGACAAGGTGTGGTTGTTTTGCCTTTTGTTGTGTGCGTTTAAATAAAGAGAGTGGTCGATGGAAGTTCAAAAGGTGCATGTTAGGCGACTATGAAGTGGGGACTTTTAGGCGTAAATGGGAAGGAATGGTTGCTGAATTTGGATTAGAGGGTAACCAGTGGGCTCAAGAAATGTATGAGAAACGAAAAATGTGGGCAACAACTCACATTCGTGGTCATTTTTTTGCTGGTTTTAGGACCACTTCTAGATGTGAAGGCCTTAATTCGCAAATAGGGAGATATGTGCATGTGAGAAATAATTTGACAGAGTTCTTGAAACAGTTCAATAGGTACATGGCCTACACTAGGCAAAGGGAACTAGAGGCAGATTTTGAGTCAATTATTGAGGATCCTGTGTTGGTCACACCATTGGAAGATCTAGAGGGTTTTGCAGCAAAGGTGTACACTAGGAAGTGCACTTGTCAAAGGATGGAGTCAATTGGACTTCCATGTGAACACATTGTTGCACTTTTGCATCACTTGGAAATAACCGAGTTGCCTGATTCACTTGTTCTACAAAGATGGACAAAGTATGCAAAACAATGTGTGGAAGGTAGTAACGTGGAAGGGCATAATAGGCAGACGTGTCCCCAACGAAGACATGAAGAAAATGCAGGTACCACCACTGAAGGAACAGATGATGATGATAACACGGGTATGGATACTCAACCCTTTTTATATGGTGCAGATTAA 1068 0.4092 METNGMDGSREENGFEEEEADQYRIDNIADLNGVNFIGLTNEEVKLYHFLNRNVEFQFYNKFALKREFAARRWNVLKNKRGETTQQAFMCFKEGFRDKKYLEREDRKQEPRAMTRCGCFAFCCVRLNKESGRWKFKRCMLGDYEVGTFRRKWEGMVAEFGLEGNQWAQEMYEKRKMWATTHIRGHFFAGFRTTSRCEGLNSQIGRYVHVRNNLTEFLKQFNRYMAYTRQRELEADFESIIEDPVLVTPLEDLEGFAAKVYTRKCTCQRMESIGLPCEHIVALLHHLEITELPDSLVLQRWTKYAKQCVEGSNVEGHNRQTCPQRRHEENAGTTTEGTDDDDNTGMDTQPFLYGAD 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi818g00004 355 MobiDBLite consensus disorder prediction 319 333 - -
Sebi818g00004 355 Pfam SWIM zinc finger 259 286 IPR007527 GO:0008270
Sebi818g00004 355 MobiDBLite consensus disorder prediction 313 355 - -
Sebi818g00004 355 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 134 IPR031052 GO:0006355
Sebi818g00004 355 SMART 26again6 262 289 IPR006564 GO:0008270
Sebi818g00004 355 Pfam FAR1 DNA-binding domain 57 136 IPR004330 -
Sebi818g00004 355 ProSiteProfiles Zinc finger SWIM-type profile. 255 287 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi818g00004 Sebi-Chr818 30547 32970 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi818g00004 FAR1 1.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi818g00004 - - tpra:123913749 197.978