Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00035 ATGAGAGGTTCTACAATCCTTCAATTCTTCTTTTTTTGTACCTTCACTTTACCCGCGTTCTTTTCCGGTATTGTAGTATCCGTGGATACCTTAACTGCAACTCAATCTCTTGGAGCTAACCAAACCCTTGTATCTCCACAACAAGTGTTTGAATTTGGCTTCTTTAATACAAGCAGTTTGAGATGGTACTTGGGTATATGGTACAAGGATTTTCCTGATAAAACAGTAATTTGGGTGGCAAACAGAGACACCCCACTTGAAAATTCCAATGGAACTCTCAAGATTGGAGATAGGGGAAACCTGCTTCTTCTCAATCAAACAGGCAACCCCATATGGTCATCAAATCAAACCACTGCTGTTACAAACCCGGTTCTTAAGCTTTTTGATACTGGGAATTTGATTCTCATGGAAGCAAACGAGAAAGACACCAACAACTATTTATGGCAGAGCTTTGATGATCCAACAGATACTTTGTTACCAGGCATGAAGCTTGGTTGGAACCTAGACACTGGTGTGGAGCGCCGCATAACATCATGGAGAGGCCAAAATGATCCATCAATAGGAGATTCTTATTTCACTCTAAATTACCATGGGATACCAGATATTTTCTTATGGAACAAACAACAAAGGGTGTTCCGAACTGGACCATGGAATGGTGAGAGGTTTGGTGGGGTACCAATACTAAACACAATTGCTGCTCTTAATGATAGTATAGTTGCTGATGAACATCAAGTGTATTACCTCCCTTCAATGCTCAATCAGTCAAGCCTGTCCAGACTTGTTGTGAACTGGACAGGAACAATTGAACGGTATGCATGGATAGAGAGTAGTCAAAGTTGGAGTCAAATATGGATTGCACCAAATGCCGATTGTGATCACTATGGAGCTTGCGGTCCCTTTGGTATATGTGACTCAAATAGTTTCCCAATGTGCCAGTGTATTCAAGGATTCAATGTCAAGGATCAGGGCCAATGGGATTTGAAAAATTTTTCTGATGGGTGTACTAGGAAGACAGAATTGGAATGTGGGAAAGACAAGTTCTTGAACATGACCAATGTGCAATTGCCAGATGCCACAAAGGTGTTTGTGGACAACAACATGACCCTATTGGAATGTAGAAATATGTGCCAGATGAATTGCTCTTGTACTGCCTATGCTAATGCAGAGATTACTAATGGTGGAACTGGTTGCGTGATGTGGGCTGATAATCTCATTGACATGAGGCAGTTTTCTGAAGGTGGTCAAGATCTCTATGTCAAATTAGCAGCTTCTGATGTAGATGACAATGGCACAGGATCTGTTGGTGGCTCTCACAAGAAAAAGAATTCAGGAAAGATTGCAGGAATTACAGTTGCTGTATTTATAGTAATTTTGGGGGTGATTATGTTCATTTTGTGGAAGAAGAGAAAAATTCTGATTATATTGAGCTGGAAAAAGAAGCAGAATGGTAATTCTGAAAGAGGCCAGAAGACGTTGCTACCTGAGGTAATAATACATTCAATAAATAAAGACAATGTAGATGAAAGGAACACAGATGACCTGGAGTTGCCATTGTTTGATTTTAATACCATAACACAAGCTACAAACTACTTCTCTCTAGCAAATAAACTTGGAGAAGGAGGCTTTGGAAGCGTTTACATGGGTAGGCTAGTGGATGGCCAAGAAATTGCTGTGAAAAGGCTATCAACAAGCTCTGGGCAAGGAAATGAGGAGTTCCTGAATGAGGTAAGATCCATTGCAAAGCTTCAACATCGAAATCTTGTACGGCTGTTTGGTTGCTGCATTGAGAAGGAAGAGAAGATGTTGATCTATGAGTACATGGAGAATAAGAGCCTAGATTCTATTTTGTTTGACACAGCAAAGAGTTCCACACTAGACTGGCCAATGCGCTTCAACATTATATGTGGAATAGCCAAAGGGCTTCTTTATCTCCATCATGACTCTAGATTTAGAATTATCCATAGGGATCTCAAGGCAAGCAACATTCTTCTTGATAGAGAAATGAATCCAAAGATATCAGATTTTGGGGTTGCTAGAATTTTTGACACTGATCAAACACATGCAAACACAAGGAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATACGCAATGGGGGGATTCTTTTCAGTGAAATCTGATGTTTACAGTTTTGGAGTTCTTGTGCTAGAGATCATAAGTGGCAAGAAGAACCGAGGATTTTATTCCTCAGATGACTTAAATCTTATTGGACATGCATGGAGGCTATGGAAAGAAGGGAATGCATTAGAAATAATGGATTCGTCATTTATTGATTCATATTCAGAATCTGAAGTTCTGAGATGCATACATGTTGCGTTCATATGTATCCAAGAACGAGCAGAAGACAGACCCACAATGTCTAATGTGGTGTTAATGTTGAGTAGTGAAAGTGCATCAATGGCAGAGCCTAAACACCCCGGTTTCGTCCTCGGAAGGAGTTCCGGCGAAAGCGACTCTTCTTCGGCTAGGCAAGATGAGTTATACACGATAAACAAAGTCACAGTTACAAGACTAGATGGCAGTCGATTTGGACCGGTTGATCAGCCTTGTTAA 2577 0.4047 MRGSTILQFFFFCTFTLPAFFSGIVVSVDTLTATQSLGANQTLVSPQQVFEFGFFNTSSLRWYLGIWYKDFPDKTVIWVANRDTPLENSNGTLKIGDRGNLLLLNQTGNPIWSSNQTTAVTNPVLKLFDTGNLILMEANEKDTNNYLWQSFDDPTDTLLPGMKLGWNLDTGVERRITSWRGQNDPSIGDSYFTLNYHGIPDIFLWNKQQRVFRTGPWNGERFGGVPILNTIAALNDSIVADEHQVYYLPSMLNQSSLSRLVVNWTGTIERYAWIESSQSWSQIWIAPNADCDHYGACGPFGICDSNSFPMCQCIQGFNVKDQGQWDLKNFSDGCTRKTELECGKDKFLNMTNVQLPDATKVFVDNNMTLLECRNMCQMNCSCTAYANAEITNGGTGCVMWADNLIDMRQFSEGGQDLYVKLAASDVDDNGTGSVGGSHKKKNSGKIAGITVAVFIVILGVIMFILWKKRKILIILSWKKKQNGNSERGQKTLLPEVIIHSINKDNVDERNTDDLELPLFDFNTITQATNYFSLANKLGEGGFGSVYMGRLVDGQEIAVKRLSTSSGQGNEEFLNEVRSIAKLQHRNLVRLFGCCIEKEEKMLIYEYMENKSLDSILFDTAKSSTLDWPMRFNIICGIAKGLLYLHHDSRFRIIHRDLKASNILLDREMNPKISDFGVARIFDTDQTHANTRRVVGTYGYMSPEYAMGGFFSVKSDVYSFGVLVLEIISGKKNRGFYSSDDLNLIGHAWRLWKEGNALEIMDSSFIDSYSESEVLRCIHVAFICIQERAEDRPTMSNVVLMLSSESASMAEPKHPGFVLGRSSGESDSSSARQDELYTINKVTVTRLDGSRFGPVDQPC 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00035 858 Pfam Protein tyrosine and serine/threonine kinase 533 799 IPR001245 GO:0004672|GO:0006468
Sebi817g00035 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 809 - -
Sebi817g00035 858 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544
Sebi817g00035 858 Pfam Domain of unknown function (DUF3403) 803 848 IPR021820 GO:0004674
Sebi817g00035 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Sebi817g00035 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 496 606 - -
Sebi817g00035 858 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 792 - -
Sebi817g00035 858 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Sebi817g00035 858 Gene3D Phosphorylase Kinase; domain 1 504 606 - -
Sebi817g00035 858 Gene3D - 24 151 IPR036426 -
Sebi817g00035 858 CDD B_lectin 34 154 IPR001480 -
Sebi817g00035 858 SMART serkin_6 531 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00035 858 Pfam D-mannose binding lectin 75 180 IPR001480 -
Sebi817g00035 858 Pfam PAN-like domain 342 407 IPR003609 -
Sebi817g00035 858 SMART ntp_6 342 421 IPR003609 -
Sebi817g00035 858 PIRSF SRK 2 849 IPR024171 GO:0004674
Sebi817g00035 858 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Sebi817g00035 858 MobiDBLite consensus disorder prediction 813 832 - -
Sebi817g00035 858 SUPERFAMILY Protein kinase-like (PK-like) 514 801 IPR011009 -
Sebi817g00035 858 Gene3D Transferase(Phosphotransferase) domain 1 607 813 - -
Sebi817g00035 858 CDD STKc_IRAK 537 801 - -
Sebi817g00035 858 SMART blect_4 34 154 IPR001480 -
Sebi817g00035 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 185 IPR036426 -
Sebi817g00035 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 151 - -
Sebi817g00035 858 CDD PAN_AP_plant 338 422 - -
Sebi817g00035 858 ProSiteProfiles Protein kinase domain profile. 531 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00035 858 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00035 Sebi-Chr817 321814 325221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00035 439 816 Receptor kinase-like Gene Family AT4G23190 52.083 9.67e-130 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi817g00035 PK_Tyr_Ser-Thr 5.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00035 - - aip:107621503 1149.81