Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00034 ATGAAGCTGGGTTGGAACTTGGACACTGGCGTGGAGCGGCGTATAACATCATGGAAAAGCCAAGATGATCCATCCATAGGAGATACTTATTTCAGTTTAAATTACCATGGGATACCCGATGTTTTCTTATGGAACAAACAGCAAAGGGTGTTTAGAACTGGACTATGGAATGGTGAGAGGTTTGGTGGAGTACCAATACTAAACACAATTGCTCCCCTTAATGACAGTATAGTTGCTGATAAACATCAAGTGTATTACCTCCCTTCATCGCTCAATCAATCTAGCCTGTCCAGACTTATTGTGAACTGGACAGGAGTAATTGAAAGGTATGCATGGATAGAGAGTAGTCAGAGTTGGAGTAAAATATGGTCTGCACCTGATGGTGATTGTGATCATTATGGAGTGTGCGGTCCCTTTGGTATATGTGACTCAAATAGTTTCCCAGTATGCCAGTGTATTCAAGGGTTTAATGTCAAGAATCAAGGGCAATGGGATTTGAGAAATTTTTCTGATGGGTGTACAAGGAAGACAGAATTGGAATGTGGGAAAGACAAGTTTTTGCACAAGACAAATGTGCAGCTGCCAGATGCCACAAAGGTTTTTGTGGACAAAAACATGACCCTATTGGAATGTAGAAATATGTGCCAGATGAATTGTTCTTGTACTGCCTATGCTAATGCAGAGATTACTAATGGTGGGACTGGTTGCGTGATGTGGACTGATAATCTCATTGACATGAGGCAGTTTTCTGCAAATGGTCAAGATCTCTATGTCAAATTAGCAGCTTCTGATGTAGATGACAGTGGCACAGGATCTCCTGGTGGGTCTGACAAGAAAAACAATGCAGGAATGATTGTAGGAATTGCAGTTGCTGTAGCTATAGTAATTTTTGGAGTGATTATATTCATTTTGTGGAAGAAGAGAAAACTGCATAGTATATTGAGGTGGAATAAGAAGCAGGATGGTAATTCTGAGAGAGGTCAGAAGGCGCTGCTACCTGAGGTAATAATGCATTCAATTAATAGGGAACATGCAGATGAAAGGAACATGGATGACCTGGAGTTACCATTGTTTGATTTTAATACCATAACACAAGCTACAAACTACTTCTCTCTAGCAAACAAACTTGGAGAAGGAGGCTTTGGAAGCGTTTACATGGGTAGGCTGGTGGATGGCCAAGAAATTGCTGTGAAAAGGTTATCAACTAGCTCTGGGCAAGGAAATGAGGAGTTCAAGAATGAGGTCAGATCCATTGCAAAGCTTCAACATCGAAATCTTGTACGACTCTTTGGTTGTTGCATTGAGAAAGAAGAGAAGATGTTGATCTATGAGTACATGGAAAATAAGAGTCTAGATTCTATTTTATTTGACACAGAGAAGAGTTCCATACTAGACTGGCCAATGCGTTTCAACATTATATGTGGAATAGCCAAGGGGCTTCTTTATCTCCATCATGACTCCAGATTTAGAATTATCCATAGGGATCTGAAGGCAAGCAATATTCTTCTTGATAGAGAAATGAACCCAAAGATATCAGATTTTGGGATTGCTAGAATTTTTGACAGTGATCAAACACAAGCAAACACAAGGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCAATGGGTGGATTCTTTTCAGTGAAATCTGATGTTTTCAGTTTTGGAGTTCTCGTGTTAGAGATCATAAGTGGCAAGAAGAACAGAGGATTTTATTCCAATGATGACATAAATCTTCTTGGACATGCATGGAGGCTGTGGAAAGATGGGAATGCATTGGAACTAATAGATCCATCATTTGGTGATTCATATTCAAAATCTGAAGTTGTAAGATGCATACATGTTGGTCTCATATGTGTCCAAGAACGGGCAGAAGACAGGCCAACAATGTCTACTGTGGCCTTGATGTTGAGCAGTGAAACTTCATCAATACCAGAACCTAAACACCCTGGTTTTGTCCTTGGAAGGAGTTCCGATGAAACCGATTCTTCTTCGGCTAAATCTCACACGATAAACCAAGTCACAGTTACAAGACTAGATGGCAGTTTTTACCTACTTAATCTCTATGAAAGAGGTAACAGAATATGGTTTACAAACTCATCAAGATCAATTCAAGAGCCAATTGCAAAGCTGTTAGATTCTGCAAACTTAGTTTTGATGGATGGAAAGAACAATGATTCTTATAGTTACATATGGCAAAGCTTTGATTATCCAACAGACACAATGTTACCAGGCGTGAAGTTGGGTTGGGATAAGACCTCAGATGATTGGACATCATTTACAGGAATTACAGCCTTCAGGCCTCAACTTTCAGTGACCAACAATGAGATAGTATATTGGGATGAACCTGGAGATAGATTGTCAAGGTTTGTGTTAAAGGATGATGGACTGCTTGAAAGATATATATGGGACAGCAAAGTTCTTCAGTGGATTGAAATGTATGAGGCAAGAAAAGACTTCTGTGATAATTATGGAGCATGTGGGAGTAATGGTGTTTGCAATATTAATGATGTGCCTGTTTACTGTGATTGTTTGAAAGGCTTCAAACCTAAATCACAAGAAGAATGGGATTCATTTAATCGCTCTAGTGGGTGCATAAGGAGAACACCATTAAACTGCACTCAAGGTGACAGATTTCAGAAATTAAGCAGGGTGAAACTTCCCATGTTGTTGCAATTCTGGACAAACAATAGCATGAGTCTTGGAGAATGTGAAGTGGAATGCTTGAAAAACTGTTCTTGCACTGCCTATGCAAATTCTGCCATAAATGAAGGGCCCCATGGATGCTTGCTTTGGTTTGGGAATTTGATTGACATTAGGCTGCTTATAAGTCAAGAGGATGTACAACTGGATCTTTATGTAAGGTTAGCCGCTTCAGAAATAGACTCCACCACTAATGCTAGTAAAAGGAGAAAGATGGCACTGATTATTTCAGCATCTTTGGCACTGCTTCTTTTGTGTACCCTTTTCTACCTTTATAAGAAGTATACTAAACGGAAGAGCACTACTGATTTGGGGCATGGAAATCAGAATGAAGATCAAACATCACCTCTTTTTGATACAGAAACTATTCTAGCAGCTACAAACAATTTTTCGATTGAGAACAAGATTGGGGAGGGGGGCTTTGGCCCAGTATACAAGGGTAAATTGGCTCAAGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACCTCAAAACAAGGCATGTCAGAGTTTATGAATGAAGTTGGATTGGTAGCCAAACTTCAACACCGTAATCTTGTGAGTGTTTTGGGTGGGTGCACTCAAGGAGAAGAAAGAATGTTGGTCTATGAATACATGCCTAATGGTAGTTTGAACCGCTTCATTTTTGGTAAGACCACCACTAATGCAAAACTATATTATTTGCCTTACTTGCAACTTGGGAAAGCTCTCCTAGCATGTCACCTGTTATGCTATTTTGCTCTTATGCTTTTGATAACCTATACTGTATTGGCTAAGTGA 3492 0.3963 MKLGWNLDTGVERRITSWKSQDDPSIGDTYFSLNYHGIPDVFLWNKQQRVFRTGLWNGERFGGVPILNTIAPLNDSIVADKHQVYYLPSSLNQSSLSRLIVNWTGVIERYAWIESSQSWSKIWSAPDGDCDHYGVCGPFGICDSNSFPVCQCIQGFNVKNQGQWDLRNFSDGCTRKTELECGKDKFLHKTNVQLPDATKVFVDKNMTLLECRNMCQMNCSCTAYANAEITNGGTGCVMWTDNLIDMRQFSANGQDLYVKLAASDVDDSGTGSPGGSDKKNNAGMIVGIAVAVAIVIFGVIIFILWKKRKLHSILRWNKKQDGNSERGQKALLPEVIMHSINREHADERNMDDLELPLFDFNTITQATNYFSLANKLGEGGFGSVYMGRLVDGQEIAVKRLSTSSGQGNEEFKNEVRSIAKLQHRNLVRLFGCCIEKEEKMLIYEYMENKSLDSILFDTEKSSILDWPMRFNIICGIAKGLLYLHHDSRFRIIHRDLKASNILLDREMNPKISDFGIARIFDSDQTQANTRRVVGTYGYMSPEYAMGGFFSVKSDVFSFGVLVLEIISGKKNRGFYSNDDINLLGHAWRLWKDGNALELIDPSFGDSYSKSEVVRCIHVGLICVQERAEDRPTMSTVALMLSSETSSIPEPKHPGFVLGRSSDETDSSSAKSHTINQVTVTRLDGSFYLLNLYERGNRIWFTNSSRSIQEPIAKLLDSANLVLMDGKNNDSYSYIWQSFDYPTDTMLPGVKLGWDKTSDDWTSFTGITAFRPQLSVTNNEIVYWDEPGDRLSRFVLKDDGLLERYIWDSKVLQWIEMYEARKDFCDNYGACGSNGVCNINDVPVYCDCLKGFKPKSQEEWDSFNRSSGCIRRTPLNCTQGDRFQKLSRVKLPMLLQFWTNNSMSLGECEVECLKNCSCTAYANSAINEGPHGCLLWFGNLIDIRLLISQEDVQLDLYVRLAASEIDSTTNASKRRKMALIISASLALLLLCTLFYLYKKYTKRKSTTDLGHGNQNEDQTSPLFDTETILAATNNFSIENKIGEGGFGPVYKGKLAQGQEIAVKRLSKTSKQGMSEFMNEVGLVAKLQHRNLVSVLGGCTQGEERMLVYEYMPNGSLNRFIFGKTTTNAKLYYLPYLQLGKALLACHLLCYFALMLLITYTVLAK 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00034 1163 Pfam D-mannose binding lectin 676 759 IPR001480 -
Sebi817g00034 1163 Pfam S-locus glycoprotein domain 51 159 IPR000858 GO:0048544
Sebi817g00034 1163 Pfam S-locus glycoprotein domain 775 855 IPR000858 GO:0048544
Sebi817g00034 1163 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 446 648 - -
Sebi817g00034 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Sebi817g00034 1163 SUPERFAMILY Protein kinase-like (PK-like) 355 675 IPR011009 -
Sebi817g00034 1163 Gene3D Hepatocyte Growth Factor 180 261 - -
Sebi817g00034 1163 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 996 1109 - -
Sebi817g00034 1163 ProSiteProfiles PAN/Apple domain profile. 181 261 IPR003609 -
Sebi817g00034 1163 Pfam Protein tyrosine and serine/threonine kinase 1035 1122 IPR001245 GO:0004672|GO:0006468
Sebi817g00034 1163 Pfam Protein tyrosine and serine/threonine kinase 372 636 IPR001245 GO:0004672|GO:0006468
Sebi817g00034 1163 Gene3D Transferase(Phosphotransferase) domain 1 446 650 - -
Sebi817g00034 1163 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Sebi817g00034 1163 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 445 - -
Sebi817g00034 1163 CDD STKc_IRAK 376 640 - -
Sebi817g00034 1163 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 631 - -
Sebi817g00034 1163 Pfam Domain of unknown function (DUF3403) 642 684 IPR021820 GO:0004674
Sebi817g00034 1163 SMART ntp_6 181 260 IPR003609 -
Sebi817g00034 1163 SMART ntp_6 877 959 IPR003609 -
Sebi817g00034 1163 CDD PAN_AP_plant 872 960 - -
Sebi817g00034 1163 SMART serkin_6 370 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00034 1163 SUPERFAMILY Protein kinase-like (PK-like) 1018 1145 IPR011009 -
Sebi817g00034 1163 Gene3D Phosphorylase Kinase; domain 1 996 1109 - -
Sebi817g00034 1163 Gene3D Phosphorylase Kinase; domain 1 334 445 - -
Sebi817g00034 1163 ProSiteProfiles Protein kinase domain profile. 370 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00034 1163 CDD PAN_AP_plant 177 261 - -
Sebi817g00034 1163 ProSiteProfiles PAN/Apple domain profile. 876 960 IPR003609 -
Sebi817g00034 1163 Pfam PAN-like domain 181 246 IPR003609 -
Sebi817g00034 1163 Pfam PAN-like domain 876 942 IPR003609 -
Sebi817g00034 1163 SUPERFAMILY alpha-D-mannose-specific plant lectins 689 756 IPR036426 -
Sebi817g00034 1163 ProSiteProfiles Protein kinase domain profile. 1034 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00034 Sebi-Chr817 309718 317601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00034 273 655 Receptor kinase-like Gene Family AT4G23190 53.590 3.56e-134 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi817g00034 PK_Tyr_Ser-Thr 8.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00034 - - vvi:100256534 1046.57