Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00033 ATGGTTGCACATTTTTGTCATGAGCTTATAGATGACTTAGGATTTGCAAGTGGCTCTCACAAGACACATAATACAGCTAGGATTGTAGGAATTACAATTTCTGCAGCTGTTATAATTTTGGGATTGGGTATCATCTTACGCAATAAGAAGAGGAAATTGCGAAGTATATTGAATGGGAAGACCGACCAGAGAGGTTCTTTGCAAAGAAATCGGGATTTGCTAATGAATGAAGTGGTATTTTCAAGTAATAGAAGCTCAGGAGAAAGGAACATGGATGACCTAGAGTTACCAATGTTTGATTTTAATACCATAACATTGGCTACAAACAACTTCTCTGAAGCAAATAAACTTGGACAAGGAGGCTTTGGTAGTGTTTACAGGGGCAGGTTGATGGAAGGCCAAGAAATTGCTGTCAAGAGGCTATCAAAAGACTCAGGTCAAGGAGTTGAAGAATTTAAGAATGAGGTCAAGTTAATTGTTAAGCTTCAACACCGAAATCTTGTTCGGCTACTTGGTTGTTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTACATGGAAAATAGAAGCCTTGATTCCATTTTGTTTGAAGCAAATACATTGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGATGGGAACTTCTCAGTGAAATCTGATGTTTTTAGCTTTGGAGTTCTTGTGTTGGAGATCATAAGTGGAAAGAAAAATAGAGGATTCTATTACTCAAACGATGATATGAATCTTTTAAAGAATGCATGGACGCAATGGAAAGAAGGCAGTGCATTGGAACTCATTGATTCATCAATTGGTGATTCATACTCAGCATCTGAAGTTCTTAGATGCATACATGTTGGACTCTTGTGTGTTCAAGAACGTGCAGAAGATAGGCCAATAATGTCTTCAGTGATCTTAATGTTGAATAGTGAAACTGCATTAATGCCACAACCAAAAAGCCCTGGATTTTCCCTAGGAAGGAATCCTGTGGAGACTGATTCTTCTTCAAGCATGAAGATCTTCTGGAACGTGGACACGGGGTGGGAGAGACACATAACGTCGTGGAGGATCACAGGCCAAGACCCTTCAACCGGAGATTATTCATTCAAGATAGTTTATCATGGCCTACCAGAGATTATCATACAGAAAAAGCAGAACACAACATACAGAAGTGGGCCTTGGAATGGGTTGAGATTCAGCGGGGTGCCAGAGATGGAACCCGAAACGGATTCAATTTTTTTTAATCTTTCTGTTGATGAAAATGGGGAACAGTACTACTCATTTTCCATTGTGGATCCCTCTGCCCTTTCAAGGGATATTGTGACTTCGGATGGTGAACTTCAGCGCCTTACATGGCTACAGAGCAGCCAGAGTTGGACCACGTTTTGGTATGCACCTAAAGATGATTGCGATCGTTACAAAGCGTGTGGTCCATATGGTATATGTGACTCGAATGCTTGGCCGCTTTGTAAGTGTATTGGAGGGTTCAGGCCTAAGAATCAGCAGGCATGGAACTTGAGAGATGGATCTGATGGGTGTGTGAGGAAGACAAATTTGGAGTGTGGGAGTGACAAGTTTTTGCATCTGCAGAATGTGAAGTTGCCTGAGACTAGCACAGTGTTTGTGAACAGGAGCATGAGTCTTGTGGAATGTGACGGTATGTGCCAGAGGAATTGTTCATGCACAGCTTATGCGAACACCGAGATAATGAATGGAGGAAGTGGTTGTGTGATGTGGATAGGTGAACTCATAGACATTAAACAGTATCCTGATGGTGGCCAAGATCTCTACGTTAGATTAGCAGCTTCTGATGTAGGATCTGCAAGTGGCTCTCACAATACAAATAACAGAGCTAAAGTTGTAGGAATCACAATTTCTGCAGCTGCTATAATTTTGGGATTGTGTATCATTTTTTGTAAGAAGAGGAAATTGCTAAATATATTGAATGGGAAGACAGACCACAGAGGTTCTTTCCAAAGAAATCGGGATTTGCTAATGAATGAGGTGGTGTTTTCAACTAATAAAGAAAGCTCAGAAGAAAAGAACATGGATGACCTTGAGTTGCCAATGTTTGATTTTAATACCATAACAATGGCTACAAACAACTTCTCTGAAGCAAATAAACTTGGACGAGGAGGCTTTGGTAGTGTTTATAGGGGCAGGTTGATGGAAGGCCAAGAAATTGCTGTCAAGAGGTTAGCAAAAAACTCAGGTCAAGGAATTGAAGAATTTAAGAATGAGGTAAAGTTAATTGTCAAGCTTCAACATAGAAATCTTGTTCGGATATTTGGTTGCTGCATTGAGAAGGGTGAGAAGTTGTTGGTGTATGAGTACATGGAAAATAAAAGCCTTGATTCCATTTTGTTTGACAAGGCCAAAAAACCCTTACTAGATTGGAAAACGCGTTTCAACATTATATGTGGAATTGCTAGAGGGCTTCTTTATCTACATCATGATTCGAGACTAAAGATTATACATAGGGATCTCAAGGCAAGCAACATTCTACTTGACTGTGATATGAACCCAAAAATATCAGACTTTGGAATAGCTAGAATTTTTGGCACAAATCAAACAGAAGCAAATACTTTGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGATGGGAACTTCTCAATGAAATCTGATGTTTTTAGCTTTGGGGTTATTATGTTAGAGATCATAAGTGGAAAGAGAAATAGAGGATTCTATTACTCAAACGATGATATGAATCTTCTAAGGAATGCATGGGGGCAGTGGAGAAAAGGAAAACCCTTGGATCTCATTGATTCATCAATTGGCGACTCATATTCACCATCTGAAGTAATTAGATGCATACATGTTGGACTCTTGTGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGTCTTCAGTGATCTTGATGTTAAGCAGTGAAACTGCATCAATGCCACAACCAAAAAGCCCTGGATTTTCGCTTGGAAAGAACCCCAGGGAGACAGATTCATCTTCAAGTAAGCAAGATAAATCATGGAGTGTGAACCAGGTCACAGTCACATTGCTTGATGCTAGATAA 3084 0.3992 MVAHFCHELIDDLGFASGSHKTHNTARIVGITISAAVIILGLGIILRNKKRKLRSILNGKTDQRGSLQRNRDLLMNEVVFSSNRSSGERNMDDLELPMFDFNTITLATNNFSEANKLGQGGFGSVYRGRLMEGQEIAVKRLSKDSGQGVEEFKNEVKLIVKLQHRNLVRLLGCCIEKDEKMLVYEYMENRSLDSILFEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFYYSNDDMNLLKNAWTQWKEGSALELIDSSIGDSYSASEVLRCIHVGLLCVQERAEDRPIMSSVILMLNSETALMPQPKSPGFSLGRNPVETDSSSSMKIFWNVDTGWERHITSWRITGQDPSTGDYSFKIVYHGLPEIIIQKKQNTTYRSGPWNGLRFSGVPEMEPETDSIFFNLSVDENGEQYYSFSIVDPSALSRDIVTSDGELQRLTWLQSSQSWTTFWYAPKDDCDRYKACGPYGICDSNAWPLCKCIGGFRPKNQQAWNLRDGSDGCVRKTNLECGSDKFLHLQNVKLPETSTVFVNRSMSLVECDGMCQRNCSCTAYANTEIMNGGSGCVMWIGELIDIKQYPDGGQDLYVRLAASDVGSASGSHNTNNRAKVVGITISAAAIILGLCIIFCKKRKLLNILNGKTDHRGSFQRNRDLLMNEVVFSTNKESSEEKNMDDLELPMFDFNTITMATNNFSEANKLGRGGFGSVYRGRLMEGQEIAVKRLAKNSGQGIEEFKNEVKLIVKLQHRNLVRIFGCCIEKGEKLLVYEYMENKSLDSILFDKAKKPLLDWKTRFNIICGIARGLLYLHHDSRLKIIHRDLKASNILLDCDMNPKISDFGIARIFGTNQTEANTLRVVGTYGYMSPEYAMDGNFSMKSDVFSFGVIMLEIISGKRNRGFYYSNDDMNLLRNAWGQWRKGKPLDLIDSSIGDSYSPSEVIRCIHVGLLCVQERAEDRPTMSSVILMLSSETASMPQPKSPGFSLGKNPRETDSSSSKQDKSWSVNQVTVTLLDAR 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00033 1027 Pfam Domain of unknown function (DUF3403) 315 342 IPR021820 GO:0004674
Sebi817g00033 1027 Pfam Domain of unknown function (DUF3403) 981 1027 IPR021820 GO:0004674
Sebi817g00033 1027 SMART ntp_6 526 605 IPR003609 -
Sebi817g00033 1027 ProSiteProfiles Protein kinase domain profile. 111 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00033 1027 ProSitePatterns Protein kinases ATP-binding region signature. 714 736 IPR017441 GO:0005524
Sebi817g00033 1027 Gene3D Phosphorylase Kinase; domain 1 670 783 - -
Sebi817g00033 1027 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 76 186 - -
Sebi817g00033 1027 MobiDBLite consensus disorder prediction 983 1015 - -
Sebi817g00033 1027 CDD PAN_AP_plant 522 606 - -
Sebi817g00033 1027 SUPERFAMILY Protein kinase-like (PK-like) 689 979 IPR011009 -
Sebi817g00033 1027 Gene3D Phosphorylase Kinase; domain 1 86 186 - -
Sebi817g00033 1027 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 371 1005 - -
Sebi817g00033 1027 FunFam cysteine-rich receptor-like protein kinase 10 148 320 - -
Sebi817g00033 1027 SUPERFAMILY Protein kinase-like (PK-like) 90 320 IPR011009 -
Sebi817g00033 1027 Pfam PAN-like domain 526 591 IPR003609 -
Sebi817g00033 1027 ProSitePatterns Protein kinases ATP-binding region signature. 117 139 IPR017441 GO:0005524
Sebi817g00033 1027 ProSiteProfiles PAN/Apple domain profile. 526 606 IPR003609 -
Sebi817g00033 1027 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 673 783 - -
Sebi817g00033 1027 CDD STKc_IRAK 714 979 - -
Sebi817g00033 1027 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 784 987 - -
Sebi817g00033 1027 SMART serkin_6 708 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00033 1027 Gene3D Transferase(Phosphotransferase) domain 1 187 322 - -
Sebi817g00033 1027 Gene3D Transferase(Phosphotransferase) domain 1 784 990 - -
Sebi817g00033 1027 ProSiteProfiles Protein kinase domain profile. 708 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00033 1027 Pfam S-locus glycoprotein domain 394 505 IPR000858 GO:0048544
Sebi817g00033 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Sebi817g00033 1027 Pfam Protein tyrosine and serine/threonine kinase 711 976 IPR001245 GO:0004672|GO:0006468
Sebi817g00033 1027 Pfam Protein tyrosine and serine/threonine kinase 114 199 IPR001245 GO:0004672|GO:0006468
Sebi817g00033 1027 Pfam Protein tyrosine and serine/threonine kinase 209 309 IPR001245 GO:0004672|GO:0006468
Sebi817g00033 1027 Pfam Receptor serine/threonine kinase 68 101 IPR022126 GO:0004674
Sebi817g00033 1027 Pfam Receptor serine/threonine kinase 664 698 IPR022126 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00033 Sebi-Chr817 298047 308520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00033 198 338 Receptor kinase-like Gene Family AT4G11530 57.746 4.30e-47 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi817g00033 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00033 - - gmx:100797331 1092.03