Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00031 ATGACGTTGTGTTCCATTGTCAACTCGATCTCCAATCTCGGAAGCGCTGTGCTTGGTGATGATGGCAATCTTGTTCTTTCAAGTCATGGGAAAAAGGTGTGGCAAAGCTTTGAGAACCCCGCTGATACATATGTTCCTGGTATGAAAGTGCCGGTGAAAGCTGCATCTGGGAAGAGCTTTGCCTTCACTTCATGGAAATCCGCCACGGATCCTTCACCTGGAAACTACACCATGGGGGTTGATCCTGAGGGGTTACCCCAGATATTGGTTTGGGAGGGACAGAACAGGAGGTGGAGAAGTGGGTACTTCACATATGAGCCTTTCAACGACACTAAGGTAAGGTTTCAGATAGGATGGGATGGGTATGAGCGGGAGTTTGGTTGGAATGAAGGTGAGAAGCATTGGAATGAGATACAGAAAGGGCCTTCGAATGAGTGTGAGGTTTATAACAAGTGTGGTAGTTTTGCAGCATGTGATTTGTCCACTTCAGGTTCAGCTATTTGTAGTTGTATAAGAGGGTTTGAACCAAAGCATAGTGATCAGTGGCATAAGGGGAACTTCTCAGGTGGGTGTCAGAGGATGACTCCACTCAAGGCTGAGAGAAATGCTAGTTCTGGAACTGAGGTGAATGTTGGAGAAGATGGTTTCTTGGTGCGTAGGTGTATGAAGTTGCCGGACTTCGCACGTGTGGTTGGCACAGAGGATTGTGAGGGCAATTGTTTGAAGAATGCTTCTTGTACTGCATACGCAAATGTGCTTGGAATTGGATGCATGGCTTGGTATGGAGAGTTGGTTGATATTCAACACTTTGAACGTGGAGGAAATACACTTTACATCAGACTCGCTGATTCTGATTTAGGTGATGGAGGAAAAAAGAACAAGATTGTGATAATATCAACTGTTGTGGGAGGGTTAATCTGCCTAGGAATCATTGTTTGGGTGGTCTGGAGCTTCAAAGGAAAACTCAAAGCTTTGCCCACAGTTTCCTCAGCTTCATGTTGCAAGAATAATGATGTACTACCAGTCTTTGATGCAACCAAGAGCAGAGAAATGTCAGCAGAATTTTCAGGATCAGCTGACCTTAAAGAAAATAAACTTGGACAAGGGGGATTCGGTCCTGTCTACAAGGGAAAGCTTCCAAGTGGAGAAGAAATAGCTGTCAAGAGGCTTTCAAGACGGTCTGGCCAAGATCCAATCAAGCAAGCCCAATTAGACTGGACCAGACGCTTTGAAATCATTGAAGGCATTGCAAGAGGACTGCTTTATCTGCATCGGGATTCAAGGCTAAGAATAATTCACCGAGATCTAAAAGCAAGCAACATTTTGTTAGATGAAAACATGAACCCAAAAATATCAGACTTTGGTTTGGCCCGGATATTTGGTGGAAACCAGAATGAAGCAATACAACCAGAGTGTGGTTATATGTCCCCTGAATATGCAATGGAGGGTCTTTTTTCAGTTAAATCAGATGTATATAGTTTTGGTATCTTACTGCTAGAGATTTTGAGTGGCCGCAGGAACACTAGCTTTCGTCACTCAGATGACTCAAGTCTCATAGGATATGCTTGGCATCTTTGGAATGAACGCAGAGCAATGGAGCTTATTGATCCTTGCATTCGTGATTCAAGTCCTAAAAACAAAGCTTTGAGGTGCATACACATAGGGATGTTGTGTGCAAGATTCAGCAGCTCATAG 1695 0.4401 MTLCSIVNSISNLGSAVLGDDGNLVLSSHGKKVWQSFENPADTYVPGMKVPVKAASGKSFAFTSWKSATDPSPGNYTMGVDPEGLPQILVWEGQNRRWRSGYFTYEPFNDTKVRFQIGWDGYEREFGWNEGEKHWNEIQKGPSNECEVYNKCGSFAACDLSTSGSAICSCIRGFEPKHSDQWHKGNFSGGCQRMTPLKAERNASSGTEVNVGEDGFLVRRCMKLPDFARVVGTEDCEGNCLKNASCTAYANVLGIGCMAWYGELVDIQHFERGGNTLYIRLADSDLGDGGKKNKIVIISTVVGGLICLGIIVWVVWSFKGKLKALPTVSSASCCKNNDVLPVFDATKSREMSAEFSGSADLKENKLGQGGFGPVYKGKLPSGEEIAVKRLSRRSGQDPIKQAQLDWTRRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEAIQPECGYMSPEYAMEGLFSVKSDVYSFGILLLEILSGRRNTSFRHSDDSSLIGYAWHLWNERRAMELIDPCIRDSSPKNKALRCIHIGMLCARFSSS 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00031 564 FunFam Lectin-domain containing receptor kinase A4.3 396 564 - -
Sebi817g00031 564 Pfam PAN-like domain 212 267 IPR003609 -
Sebi817g00031 564 SMART serkin_6 360 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00031 564 CDD PAN_AP_plant 210 282 - -
Sebi817g00031 564 ProSiteProfiles EGF-like domain profile. 142 180 IPR000742 -
Sebi817g00031 564 Gene3D Transferase(Phosphotransferase) domain 1 400 564 - -
Sebi817g00031 564 Pfam Protein tyrosine and serine/threonine kinase 401 505 IPR001245 GO:0004672|GO:0006468
Sebi817g00031 564 ProSiteProfiles Protein kinase domain profile. 247 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00031 564 SMART ntp_6 211 281 IPR003609 -
Sebi817g00031 564 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 559 - -
Sebi817g00031 564 Pfam D-mannose binding lectin 11 66 IPR001480 -
Sebi817g00031 564 Pfam S-locus glycoprotein domain 99 177 IPR000858 GO:0048544
Sebi817g00031 564 Gene3D Transferase(Phosphotransferase) domain 1 344 399 - -
Sebi817g00031 564 SUPERFAMILY alpha-D-mannose-specific plant lectins 8 102 IPR036426 -
Sebi817g00031 564 Gene3D - 5 106 - -
Sebi817g00031 564 ProSiteProfiles PAN/Apple domain profile. 211 282 IPR003609 -
Sebi817g00031 564 SUPERFAMILY Protein kinase-like (PK-like) 363 561 IPR011009 -
Sebi817g00031 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00031 Sebi-Chr817 281129 284802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00031 361 560 Receptor kinase-like Gene Family AT4G23280 60.194 3.64e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi817g00031 PK_Tyr_Ser-Thr 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00031 - - gmx:102660295 857.055