Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00028 ATGGGATTCAGTCTGCTAGCAATTCTTTTTCTCATTCTCCCAACCTTTTACATACATTATGGCACTGCCTTAGACACCATTACAGCATCTCAATTCATTAAAGATCCTCAAACTATAAGCTCTAAGGACGACGCATTCAAGCTAGGATTCTTCAACCCTCCCAATCCCAACACAACAAATCGCTATGTAGGAATCTGGTACCTCTCTCAGTCCAACGTCATATGGGTGGCCAACAGAGACCAACCGCTACACGACTCTTCTGGTGTTGTCACCATATCTGACGACAGAAACCTTGTAGTACTGAATGGGACAAAACATGTTATTTGGTCATCAAATGTCTCAACTATTGCATTTGCATCCAATACCAATTCCACTGCCCAACTTCTAAATACTGGGAACCTTGTATTGATGGATGACACAACAGGAAAGATAATATGGGAGAGTTTCAAACATCCCTCTGACACTTTCCTTCCAAATATGATAATTAGCACCAACCAAAAAACAGGGGAGAAAGTAAAAGCTACTTCATGGAAAAGTCCTTCTAATCCAGCCATTGGAAACTTCTCTGGCAGCCTTGACCGTCTCAGTGCTCCTGAAGTCTTTGTTTGGAAACAATCACAGCCATTCTGGCGCTCAGGTCCATGGAACGGTCAAGTCTTTATTGGTTTAGCCAGCAATTTGATGTATACTTCTGCATATCTGAATGGATTCAGCATAGGAAGGGGAGAGAATGATACTGTTGAGATAACTTACACTCTGCCAAATAACTCTTTCTTTGGAACCATTGTTGTGAGTCCAGTAGGGAAGCTGGAGTACACTGCCTGGATCAACAGGTTTCTAGTTGGGAAGCGGGTATTTCAGGAAAATGACTGTGATGTTTATGGCTTTTGTGGCCCTTATGGAAGCTGTGATTCCAACAATTCACCAATCTGCACCTGTTTGAGAGGCTTTGAGCCGAGAAACGTGGATGAATGGAATAGACAAAACTGGACAAGTGGTTGTGTGAGAAAGGAAGCACTGCAGTGTGAGAGGGTGAAAAATGGAAGTGAAGCTGGTGAAGGAGATGGATTTTTGAAACTGCAGATGACAAAAGTACCAGACTTTGCACAACAGTCATATCTTTCAGTTGATGCGTGTAGAACTGAGTGCCTCAAGAATTGTTCTTGTACAGCTTATGCATATGATGGTGGCATTGGCTGTTTGAGTTGGAGTGGGAAGTTAATTGACATAGTGAGGTTCTCAAGTGGAGGAGTTGATCTTTACATACGCCAACCTTATTCAGAATTACTTGATGTAGATGGGAAAAGAAACGTTACAGCAATCATCATAGTTTCAGTGACAGTTGGAGCAGTTATTGTTGCTACCTGTACATATTTCTTATGGTCATGGACTTCTAAACATACAGACCAAGTCAAAAAGAAGGTTTTAGATTGGCAAAAACGGTTAAACATAATTGAAGGAATCTCTAGAGGTCTTCTTTATCTCCATAGAGATTCCAGATTAAGAATAATACATAGAGACCTGAAGCCAAGTAATATCTTGCTGGATGGAGAACTGAATCCAAAAATATCTGACTTTGGTATGGCAAGAATCTTTGGGGGCAGTGAAAATGAGGCCAACACTAGAAGAATTGCATGGAAACTATGGAATGAAGAGGAGATTGTATCTTTGATAGATCCAGATGTATCTAATCCGGATTATGTCGATCATATTTTGAGATGCATACACATTGGACTTCTATGTGTGCAAGAATTTGCAAAGGAGAGGCCTACTATGGCCACCGTTGTTTCAATGCTTAATAGTGAGATTGTTAATTTTCCTGCTCCAAGGCAACCCGCATTCACTCAAAGACAGATTGAGCAGAGCGGAGATTCATCTCAACAGAGTCATGATTCAAATTCCATCAACAATGTTACTGTCACAAACTTGCAAGGCAGATAG 1941 0.4106 MGFSLLAILFLILPTFYIHYGTALDTITASQFIKDPQTISSKDDAFKLGFFNPPNPNTTNRYVGIWYLSQSNVIWVANRDQPLHDSSGVVTISDDRNLVVLNGTKHVIWSSNVSTIAFASNTNSTAQLLNTGNLVLMDDTTGKIIWESFKHPSDTFLPNMIISTNQKTGEKVKATSWKSPSNPAIGNFSGSLDRLSAPEVFVWKQSQPFWRSGPWNGQVFIGLASNLMYTSAYLNGFSIGRGENDTVEITYTLPNNSFFGTIVVSPVGKLEYTAWINRFLVGKRVFQENDCDVYGFCGPYGSCDSNNSPICTCLRGFEPRNVDEWNRQNWTSGCVRKEALQCERVKNGSEAGEGDGFLKLQMTKVPDFAQQSYLSVDACRTECLKNCSCTAYAYDGGIGCLSWSGKLIDIVRFSSGGVDLYIRQPYSELLDVDGKRNVTAIIIVSVTVGAVIVATCTYFLWSWTSKHTDQVKKKVLDWQKRLNIIEGISRGLLYLHRDSRLRIIHRDLKPSNILLDGELNPKISDFGMARIFGGSENEANTRRIAWKLWNEEEIVSLIDPDVSNPDYVDHILRCIHIGLLCVQEFAKERPTMATVVSMLNSEIVNFPAPRQPAFTQRQIEQSGDSSQQSHDSNSINNVTVTNLQGR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00028 646 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Sebi817g00028 646 ProSiteProfiles Bulb-type lectin domain profile. 24 149 IPR001480 -
Sebi817g00028 646 Pfam Protein kinase domain 472 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00028 646 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 183 IPR036426 -
Sebi817g00028 646 Gene3D - 19 150 IPR036426 -
Sebi817g00028 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Sebi817g00028 646 CDD EGF_CA 289 321 - -
Sebi817g00028 646 MobiDBLite consensus disorder prediction 610 646 - -
Sebi817g00028 646 CDD PAN_AP_plant 340 423 - -
Sebi817g00028 646 MobiDBLite consensus disorder prediction 611 646 - -
Sebi817g00028 646 Pfam D-mannose binding lectin 73 178 IPR001480 -
Sebi817g00028 646 SUPERFAMILY Protein kinase-like (PK-like) 469 615 IPR011009 -
Sebi817g00028 646 SMART ntp_6 352 424 IPR003609 -
Sebi817g00028 646 SMART blect_4 30 152 IPR001480 -
Sebi817g00028 646 FunFam Os07g0541700 protein 465 546 - -
Sebi817g00028 646 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 464 - -
Sebi817g00028 646 CDD B_lectin 30 152 IPR001480 -
Sebi817g00028 646 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Sebi817g00028 646 Pfam PAN-like domain 353 410 IPR003609 -
Sebi817g00028 646 SMART tyrkin_6 345 599 IPR020635 GO:0004713|GO:0006468
Sebi817g00028 646 ProSiteProfiles Protein kinase domain profile. 233 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00028 646 Pfam Domain of unknown function (DUF3403) 601 646 IPR021820 GO:0004674
Sebi817g00028 646 Gene3D Transferase(Phosphotransferase) domain 1 460 538 - -
Sebi817g00028 646 Gene3D Transferase(Phosphotransferase) domain 1 539 605 - -
Sebi817g00028 646 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00028 Sebi-Chr817 258727 262074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00028 469 646 Receptor kinase-like Gene Family AT4G23280 36.864 4.88e-40 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi817g00028 Pkinase 2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00028 - - gmx:112998788 676.011