Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00026 ATGGGATTCAGAAGTGACACTAGCTTGGTAAATGCTTTGCTCATATTTTCCATTATTTTTCTGGGTTTGAGCTCTGCTACTGCCAGGGATACCATTACATTGTCTCAATTCATCAGAGACTCAGAGACAGTAAACTCAAGTGACAGTGTCTTCAAGCTTGGATTTTTCAGCCCTACAAATTCAACAAACCGTTACTTAGGAATCTGGTATCTCTCTGACTCCAACGTCATATGGATAGCTAATAGAGACCAACCACTCAAAGACTCTTCTGGGGTTTTGAAGATCTCTGAAAACGGTAATCTTGTGGTTCTAGATGGCAAAAAACATGTAATTTGGTCGTCCAATGTGTCAAACACTGCAAACACTTCCACTGCTCAGCTTTTACGTTCTGGAAATCTGGTGCTGTTAGATGGAACCAGTGGACAGACCATATGGGAGAGTTTCAAACATCCTTGTGATGCAGCAGTGCCAACTATGAGAATCAGTGCTAACAGAGTCACGGGTCAGAAAATAAGGTTTATATCAAGGAAAAGTGATTCTGATCCTTCTACTGGGTACTTCTCTGCTAGTCTTGAACGTCTGGATGCACCAGAAGTGTTTTTCTGGATCAATGGAACTCGCCCATATTGGAGGACTGGTCCATGGAATGGTCGAATCTTTATTGGGACACCACTGATGTCAACTGGGTATCTATATGGATGGAATGTGGGATATGAAGGGAATGAAACTGTTTATCTAACTTACAGTTTTGCTGACCAATCTGCATTTGGAATCCTTACCTTGAATCCACAAGGTAAGCTTAAATTGGTAAGATATTATAACAGAAAGCAAGTGTTGGATGTGGTGTTGGAGAATTCTGTTTGTGATGTTTATGGCACATGTGGGGCATATGGAAGCTGTGATGTGCAGAGCTCACCAATCTGTACCTGTTTGAGAGGGTATGAACCCAGGAATCCAGAGGAGTGGAATAGGCAAAATTGGACTAGTGGGTGTGTGAGGAAGGAACCACTCAAGTGTGAGAGGTTGAAAAATGGAAGTGAAACTAGACAAGAAGATCAATTTTTGAAGCTTCAAATGATGAAAGTTCCAGACTTTGCAGAGAGGTTAGATGTTGAGGAAGGCCAATGTGAACCCATGTGCTTGAAGAATTGCTCTTGTTTGGCATATGCATATGATGCTGGCATTGGTTGCTTGTATTGGAGTGGACCTTTAATTGACTTACAACAATTCACAAGTGCAGGAATTGATCTTTACATCCGTAATGCAACTAACCATACTAATAAAAGAAGAAACAAGGGCTTAATCATTGGAATTACAGTGGCTGCTGGAACCATTATCTTGGCCACCTGTGCATATCTTGCCATTTGTACATATCACTCGCGGAAAGGAGCTGCTAAACATTCAGAAATTCAGAGTCAAAGAGTGACCGGGGTGGAGAAACAAGTTAAACTGGATGAGCTACCGTTATTTGATTTAGAAGTGGTTGCAATTGCTACAAACAACTTTCACACAGCTAATGTGCTTGGAAAGGGCGGTTTTGGTCCAGTGTATAAGGGACTATTGCCAGATGGTCAGGAAATTGCAGTGAAAAGACTCTCCAGAACATCTGGACAAGGTGAAGATGAGGTTAATACCAAAAGGGTTGTTGGCACATATGGCTATATGTCCCCTGAATATGCAATGGAAGGATTGTTTTCTGAGAAATCAGATGTCTACAGTTTTGGAGTTTTGTTACTAGAAATTGTTAGTGGAAAAAGAAACACTAGCTTTCGTAATGATGAACAATCTCTCAGTCTCGTAGGATTTGCGTGGAATCTATGGAACGAAGACAAGATTAGGTCTATGATAGATCCAGATTTATCAACTTCAGGTTCTGAGAATCATATTTTGAGGTGCATCCACATAGCATTTCTATGTGTGCAAGAAGTTGCAAAATCAAGACCAACTATGACTACTGTAGTCTTGATGCTTAATAGTGAGATTTCCCATCTCCCTCCTCCTAAGCAAGTTGCATTTGTGCAGAAGCAATATTCATCAAGTTTTGAGTCTTCTTCTAGGGAAAATCAATGCAACTCCAATAATAATGTAACTCTTACTGAGATCCAAGGCAGATAA 2115 0.4066 MGFRSDTSLVNALLIFSIIFLGLSSATARDTITLSQFIRDSETVNSSDSVFKLGFFSPTNSTNRYLGIWYLSDSNVIWIANRDQPLKDSSGVLKISENGNLVVLDGKKHVIWSSNVSNTANTSTAQLLRSGNLVLLDGTSGQTIWESFKHPCDAAVPTMRISANRVTGQKIRFISRKSDSDPSTGYFSASLERLDAPEVFFWINGTRPYWRTGPWNGRIFIGTPLMSTGYLYGWNVGYEGNETVYLTYSFADQSAFGILTLNPQGKLKLVRYYNRKQVLDVVLENSVCDVYGTCGAYGSCDVQSSPICTCLRGYEPRNPEEWNRQNWTSGCVRKEPLKCERLKNGSETRQEDQFLKLQMMKVPDFAERLDVEEGQCEPMCLKNCSCLAYAYDAGIGCLYWSGPLIDLQQFTSAGIDLYIRNATNHTNKRRNKGLIIGITVAAGTIILATCAYLAICTYHSRKGAAKHSEIQSQRVTGVEKQVKLDELPLFDLEVVAIATNNFHTANVLGKGGFGPVYKGLLPDGQEIAVKRLSRTSGQGEDEVNTKRVVGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEIVSGKRNTSFRNDEQSLSLVGFAWNLWNEDKIRSMIDPDLSTSGSENHILRCIHIAFLCVQEVAKSRPTMTTVVLMLNSEISHLPPPKQVAFVQKQYSSSFESSSRENQCNSNNNVTLTEIQGR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00026 704 PIRSF SRK 4 545 IPR024171 GO:0004674
Sebi817g00026 704 PIRSF SRK 540 704 IPR024171 GO:0004674
Sebi817g00026 704 Gene3D - 24 149 IPR036426 -
Sebi817g00026 704 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Sebi817g00026 704 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Sebi817g00026 704 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 538 662 - -
Sebi817g00026 704 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 148 - -
Sebi817g00026 704 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 217 IPR036426 -
Sebi817g00026 704 MobiDBLite consensus disorder prediction 683 704 - -
Sebi817g00026 704 SMART ntp_6 349 421 IPR003609 -
Sebi817g00026 704 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 648 - -
Sebi817g00026 704 Pfam PAN-like domain 349 407 IPR003609 -
Sebi817g00026 704 SMART blect_4 35 151 IPR001480 -
Sebi817g00026 704 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Sebi817g00026 704 CDD PAN_AP_plant 336 420 - -
Sebi817g00026 704 CDD B_lectin 35 151 IPR001480 -
Sebi817g00026 704 Pfam D-mannose binding lectin 76 177 IPR001480 -
Sebi817g00026 704 Gene3D Transferase(Phosphotransferase) domain 1 527 668 - -
Sebi817g00026 704 SUPERFAMILY Protein kinase-like (PK-like) 486 683 IPR011009 -
Sebi817g00026 704 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Sebi817g00026 704 ProSiteProfiles Protein kinase domain profile. 245 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00026 704 Pfam Protein tyrosine and serine/threonine kinase 534 655 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00026 Sebi-Chr817 250113 253233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00026 536 704 Receptor kinase-like Gene Family AT4G21410 52.907 1.96e-42 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi817g00026 PK_Tyr_Ser-Thr 1.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00026 - - gmx:112998788 844.343