Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00025 ATGGTTCTGCTCCTACTTTCCTCCTTTGGTCTGTGCTCAAGTTCTGCCAACGATACCATTGCATCAGCCCAATTCATTAGAGACCCTGACACACTAACCTCAAATAATAGTGACTTCAAGTTAGGATTCTTCAGCCCTCAAAATTCAACAAATCGCTATGTGGGAATCTGGTATCTCTCTCAATCCAATGTTATATGGGTAGCTAACAGAAACCAGCCACTAACAGAAAACTCTTCTGGGATTGTTAAGATTTCTGAGGATGGCAATCTTGTGGTCTTAAACAGCCAGAATAAGGTTGTTTGGTCATCCAATGTCACAAGTATTGCTACCAATTCAACTGCAAAACTTCTAGAGACAGGAAATCTAGTTCTGCTAGATGATGCAACAGGAGAAGTTATGTGGGAGAGTTTCCAACATCCTTGTGATGTTCTTGTGCCAAAGATGAAACTCAGCATCAACAGAATAACTGGTGAGAGAGTATACTTAACATCATGGAAAAACTCTTCTGATCCATCCATTGGATACTATTCCGGTACTCTTGAACGCCCCAATGCTCCAGAGTTTTTTCTCTGGGTCAATGGAACTCTTCCATATGCTCGCTCTGGTCCATGGAATGGTCGAATTTTTATTGGTTCTCCCCTGATGTCAAATGGGTATCTATATGGATGGAAAGTGATAAATGAAGATGATGGAACTGTTTATGTTTCTTATAATTTCGAGAATCAATCTCAGTTTGGAATCTTGGCCTTGAATCCACAGGGTCAACTAACAATAGCATGGTGGAACAACAGAAAGGAAGTGTTGAGACAGGTGATCCAAGGAAGTACTTGTGATCTTTATGGAATTTGTGGGGCATTTGGAAGCTGTAATTCGCAGAGCTCACCAATATGCAACTGTTTGAATGGTTTTAAGCCCAAAAATGTAGAAGAGTGGAATAGGAAAAATTGGACTAGTGGGTGTGAAAGGAGGGAGCCATTGCAATGTGGGGGGCTGACAAATGGAAGTGAAGTTAGCAAAGATGGGTTTTTGAAACACCAGAATATGAAAGTGCCAGACTTTGCAGAAAGGTCAGCTTCTTTGGAAAGTGAATGCAGAGCTCAGTGCTTGGAGAATTGCTCTTGCTTGGCATATGCATATGAGAGTGGTGTTGGATGTATGGTTTGGAGCGGAGACTTGATAGACATGCAAACATTCTCAAGTGGAGGGGTTGATCTTTACATTCGTGTGGCACCTTCAGAACTCGGAAAATTAATTTCACGAAGACAAAGAATGAAGCTGGAAACCCAGCAGAGACAAAAAAAACTGGACGATCAACAACCGCTTTTTAAATTTGAAGAGCTTGCAACTGCCACAGACAATTTTCACTTAGCTAACGTGCTTGGAAAAGGTGGTTTTGGTTTAGTATATAAGGGACAATTGAAAGATGGACAGGAAATAGCAGTGAAAAGACTTTCCAAGACATCTGGACAAGGGTTAGAAGAATATCCGGTAAAAAAGAAGGATCTAGATTGGCCAAAACGCTTCAATATAATTGAAGGAATCTCTCGAGGTTTGCTTTACCTCCACAGAGATTCTAGACTGAAAATTATACATCGAGATTTAAAGGTTAGTAACATCTTGTTGGATAAAGAGATGAATCCAAAAATATCTGACTTTGGTATGGCCAAAATATTTGGAGGCAATGATATACAAGCTAGTACTAGCAGAGTTGTTGGAACATTTGGCTATATGCCTCCAGAGTATGCATTGCGAGGGTTGTTTTCTGAGAAGTCAGATGTGTTTAGCTTTGGAGTGTTGGTACTAGAGATTATTAGTGGCAAAAAAATCAGTAGCTATTATGACCATGACCTATCATTGAGCCTCTTAGGATTTGCATGGAAATTATGGAATGAAAATGACATGCAATCCCTGATAGACCAAGAAATATGTAATCGAGATCCAGATTATATGAAAGAGATTTATAGATGCATACACATTGGACTTCTTTGTGTACAAGAATTTGCAAAAGAGAGGCCTAGTATGGGTACAGTAGTTTCAATGCTCAATAGTGAGATTGTGAATCTGCCACTCCCATCACGTCCCGCATTCAGCGAAAGGCAAATTTTATCGAGTGCAGAATCATCTTCTTCTCATCAGCACAGAACACACTCCATCAACAATGTTACTGTCACAGACATACAAGGTAGATAG 2190 0.4009 MVLLLLSSFGLCSSSANDTIASAQFIRDPDTLTSNNSDFKLGFFSPQNSTNRYVGIWYLSQSNVIWVANRNQPLTENSSGIVKISEDGNLVVLNSQNKVVWSSNVTSIATNSTAKLLETGNLVLLDDATGEVMWESFQHPCDVLVPKMKLSINRITGERVYLTSWKNSSDPSIGYYSGTLERPNAPEFFLWVNGTLPYARSGPWNGRIFIGSPLMSNGYLYGWKVINEDDGTVYVSYNFENQSQFGILALNPQGQLTIAWWNNRKEVLRQVIQGSTCDLYGICGAFGSCNSQSSPICNCLNGFKPKNVEEWNRKNWTSGCERREPLQCGGLTNGSEVSKDGFLKHQNMKVPDFAERSASLESECRAQCLENCSCLAYAYESGVGCMVWSGDLIDMQTFSSGGVDLYIRVAPSELGKLISRRQRMKLETQQRQKKLDDQQPLFKFEELATATDNFHLANVLGKGGFGLVYKGQLKDGQEIAVKRLSKTSGQGLEEYPVKKKDLDWPKRFNIIEGISRGLLYLHRDSRLKIIHRDLKVSNILLDKEMNPKISDFGMAKIFGGNDIQASTSRVVGTFGYMPPEYALRGLFSEKSDVFSFGVLVLEIISGKKISSYYDHDLSLSLLGFAWKLWNENDMQSLIDQEICNRDPDYMKEIYRCIHIGLLCVQEFAKERPSMGTVVSMLNSEIVNLPLPSRPAFSERQILSSAESSSSHQHRTHSINNVTVTDIQGR 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00025 729 SMART serkin_6 454 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00025 729 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 673 - -
Sebi817g00025 729 PIRSF SRK 416 497 IPR024171 GO:0004674
Sebi817g00025 729 PIRSF SRK 1 425 IPR024171 GO:0004674
Sebi817g00025 729 PIRSF SRK 495 729 IPR024171 GO:0004674
Sebi817g00025 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Sebi817g00025 729 Gene3D Transferase(Phosphotransferase) domain 1 496 687 - -
Sebi817g00025 729 Gene3D Phosphorylase Kinase; domain 1 425 495 - -
Sebi817g00025 729 MobiDBLite consensus disorder prediction 704 729 - -
Sebi817g00025 729 CDD PAN_AP_plant 325 410 - -
Sebi817g00025 729 ProSiteProfiles Protein kinase domain profile. 392 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi817g00025 729 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 171 IPR036426 -
Sebi817g00025 729 SMART blect_4 23 140 IPR001480 -
Sebi817g00025 729 Gene3D - 12 138 IPR036426 -
Sebi817g00025 729 SMART ntp_6 337 409 IPR003609 -
Sebi817g00025 729 ProSiteProfiles Bulb-type lectin domain profile. 17 137 IPR001480 -
Sebi817g00025 729 Pfam PAN-like domain 337 395 IPR003609 -
Sebi817g00025 729 Pfam Protein tyrosine and serine/threonine kinase 499 681 IPR001245 GO:0004672|GO:0006468
Sebi817g00025 729 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 492 689 - -
Sebi817g00025 729 Pfam S-locus glycoprotein domain 200 307 IPR000858 GO:0048544
Sebi817g00025 729 SUPERFAMILY Protein kinase-like (PK-like) 440 719 IPR011009 -
Sebi817g00025 729 Pfam D-mannose binding lectin 64 166 IPR001480 -
Sebi817g00025 729 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 13 137 - -
Sebi817g00025 729 ProSitePatterns Protein kinases ATP-binding region signature. 460 482 IPR017441 GO:0005524
Sebi817g00025 729 ProSiteProfiles PAN/Apple domain profile. 328 410 IPR003609 -
Sebi817g00025 729 CDD B_lectin 31 140 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00025 Sebi-Chr817 240449 243601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00025 417 717 Receptor kinase-like Gene Family AT4G05200 45.299 4.03e-89 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi817g00025 PK_Tyr_Ser-Thr 9.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00025 - - gmx:106794168 1051.2