Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00020 ATGGATTTTGATCTTGAAGACCCACTAGCCAGCTTCAAGGAACAGCAAACCTGTACTATATCTCAACTCTTTGCCTCGGAATCTGATCACATGCCCTCACCAAACTCCTTAAGTTCAACACATTTTCATGACTCCTTCCGTTGTGAAACCATTTCTCTCATACTTCAGGTCCAGCTTTCTTGCAATTTGGACCCGTTTGTAGCTTATCTTGCCATAAATTACTTGCACCGTTTCATGTCAAGGCAAGAAATTCCGCAGGGGAAGCCGTGGTTACTCAGGCTCGTTGGTATATCCTGTCTTTCTCTCGCTTCAAAGATGAAGAACACACCTTTACCATTTACCATTATGCAGAAAGAAGGTTGCAACTTTGATGCTCAAAGTATTGAGAGAATGGAACTCGTTATTCTGGGGGCTCTGAATTGGCGTATGAGGTCAATTACACCTTTTCCCTTCTTGCATTTCTTCACCTCTTTAGCTGAAATCAAAGACCAACCACTGAAGCAAGCACTTAAAGATCGAGCTTCAGAGATAATCTTCAATGCTCATAATGATATTAAGCTTTTAGAGTATAAACCTTCAACTATTGCAGCAACTGCCCTTATATGTGCATCTCATGAACTATTCCCGCAGCAATATTCTAATATTAGAGCTTCAATCACAGCTTGTGTGTATGTAAACGAGGAGACATTGTCCAAGTGCTTTGATTTGATGAAAGAGATGGTGAGAATGGAAGGAAAGGAGTTAATGATAGATTCAAATACAAGCTTCTTAAGCACTGAAACTCCAGTGAGTGTGCTGGAGAGAAGCACCAAGCGTCAGAGAATTTGA 828 0.4094 MDFDLEDPLASFKEQQTCTISQLFASESDHMPSPNSLSSTHFHDSFRCETISLILQVQLSCNLDPFVAYLAINYLHRFMSRQEIPQGKPWLLRLVGISCLSLASKMKNTPLPFTIMQKEGCNFDAQSIERMELVILGALNWRMRSITPFPFLHFFTSLAEIKDQPLKQALKDRASEIIFNAHNDIKLLEYKPSTIAATALICASHELFPQQYSNIRASITACVYVNEETLSKCFDLMKEMVRMEGKELMIDSNTSFLSTETPVSVLERSTKRQRI 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00020 275 SMART Cyclin_C_2 146 275 IPR004367 -
Sebi817g00020 275 Pfam Cyclin, N-terminal domain 22 143 IPR006671 -
Sebi817g00020 275 SUPERFAMILY Cyclin-like 19 143 IPR036915 -
Sebi817g00020 275 Gene3D - 22 235 - -
Sebi817g00020 275 SMART cyclin_7 52 137 IPR013763 -
Sebi817g00020 275 SUPERFAMILY Cyclin-like 128 242 IPR036915 -
Sebi817g00020 275 Pfam Cyclin, C-terminal domain 146 242 IPR004367 -
Sebi817g00020 275 FunFam D6-type cyclin 32 141 - -
Sebi817g00020 275 CDD CYCLIN_AtCycD-like_rpt2 146 237 - -
Sebi817g00020 275 Gene3D - 33 144 - -
Sebi817g00020 275 PANTHER CYCLINS 41 242 IPR039361 -
Sebi817g00020 275 FunFam D6-type cyclin 142 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00020 Sebi-Chr817 198987 200320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00020 1 268 Core Cell Cycle Gene Families AT4G03270 42.199 1.50e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00020 K18812 - gmx:100799985 429.483