Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi817g00004 ATGAATAGACAAAATATAGGTCCTCCCCATGCTTGTCCTCTATGCAGGCGTCAACGCAGAAGATCTGGATGCGATGGCAACTGTGAGTTTGGGCGATACTTCCCTGCCAATAGAGTAGAAGAATTTGAAAATGCATTCAGGCTTTTTGGTGTGAACAACATGCTGAGGATTTTGCGGACGGTAGAACCTCAGCAAAGGCAAGCTGCTGCAGATTCTATAATGATAGAGGGCACTGCATGGAGAAATAACCCTCCTCATGGTATACTTGGTCATGAGTTGGAACTTAGATCACAGATTCGATCTTCTTTCAGGGAATTGCAATCTGTAAACCAACTCCTTTCATTTTTCAGAAATCAAGCCACAGGAGGGCCAAACCCTAACATGCAAATGGGTAACACTTCTCAACCTGTTGGTGTAGCCACACAATTGTCCACCTTGGCTGCAGGAACACCTGCTGGAGGCGGAATGGATCCCATTAAACCTAACAGGCCAGAAACTTTTCTTGAAAGAGGAGAATCAAGCACTGTTGCATCCAAGGAGAATGTTAAAGAGAAAGGGAAAGAAATCGTTGTTGAAGAAAATGAGTCAGAAGCCGATGAGTAG 603 0.4444 MNRQNIGPPHACPLCRRQRRRSGCDGNCEFGRYFPANRVEEFENAFRLFGVNNMLRILRTVEPQQRQAAADSIMIEGTAWRNNPPHGILGHELELRSQIRSSFRELQSVNQLLSFFRNQATGGPNPNMQMGNTSQPVGVATQLSTLAAGTPAGGGMDPIKPNRPETFLERGESSTVASKENVKEKGKEIVVEENESEADE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi817g00004 200 ProSiteProfiles LOB domain profile. 10 113 IPR004883 -
Sebi817g00004 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 143 - -
Sebi817g00004 200 Pfam Lateral organ boundaries (LOB) domain 11 110 IPR004883 -
Sebi817g00004 200 MobiDBLite consensus disorder prediction 150 200 - -
Sebi817g00004 200 MobiDBLite consensus disorder prediction 176 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi817g00004 Sebi-Chr817 38483 39320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi817g00004 11 130 AS2 family AT3G13850 36.885 7.58e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi817g00004 LOB 2.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi817g00004 - - aprc:113866120 141.354