Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi816g00004 ATGGATTGTAGGAGATCCTCTGCTCTTTTTCTGTTCCTCCTTTGCTTTACTTCATTTCTTCTGATATGTCACTCAACACCCCAACCTCCCCTGAAGAGTTACATTGTCTACACTGGTGACAGCATGAAGGATGAAGCTTCTGCATTGACCCTTTACACAAGCATGCTACAAGAAGTTGTAGACAGCAAAGCTGAATCGAGGTCTGTACTGCACCACTACAAACGTAGTTTCGGTGGCTTTGTTGTGGAGCTAACAGAGGAGGAAGCTGAAAGAATGGCTGGACTTGATGGAGTGGTGTCTGTCTTTCCTAATGAAAAGAAACAACTCCTTACAACAAGGTCTTGGGATTTTATTGGCTTTCCACTACAAGCACAAAGAGCAGCAACTGAAAGTAATGTCATCATTGGACTACTTGACTCTGGAATCTGGCCAGAATCAGAGAGTTTCAATGACAAAGGGTTCAGTCCACCACCTAGTAAATGGAAGGGCACTTGCCAAACTACTAATTTCACATGCAATAACAAAATTATTGGAGCTAAGTATTACAGAGCTGATGGGTCATTTAGCGATGAGGATCTAAAATCTCCAAGAGATTCAGATGGTCATGGAACTCATACAGCATCAACAGCAGCTGGTAACCCAGTTAGCACAGCTAGCATGTTAGGCCTTGCACAGGGAACAGCAAGAGGTGGAGCTATATCAGCACGTATTGCTGTCTATAAAGTGTGTTGGTTTGATGGATGTTTTGATGCGGACATCCTTGCTGCATTTGATGATGCAATTGCAGATGGGGTTGACATAATATCAGTTTCAATTGGAGGGTTCACTGATAGTAACTATTTCAAAGATGTATTAGGAATTGGAGCATTTCATGCTGTGAGAAGTGGAATATTGACAGTAACTTCAGCAGGGAATGGAGGTCCAAGACCTTCCTCTCTGTCAAATTTTACACCTTGGTCAATTTCTGTGGGTGCTAGCACCATAGACAGGAAGTTTGTAACCAAGGTTGAATTAGGTGACAACAGAACTTATGAGGGAATCTCAGTAAATTCATTTGACCTTAAGGGAGAATTGTATCCTATAATCTATGCTGGAGATGCACCAAACACTAAGGGAGGCTACGATGGATCTACATCCAGGTTTTGCTTCGATGATACGTTGGACGAAAATTTAGTTAAGGGCAAAATTGTTCTATGTGACATCAGAAGCAAAGCGGCAGGCCCCTTTTATGCTGGTGCTGTTGGGGCACTGATACAAGGACAAACTTCTAGAGATCTTACTCCTTCTCTTCCTTTGGCTGGATCTTACCTTGACTTGCATGATGGTCTCTCTGTATATGACTACATTAACTCTACAAGGACTCCAAATGCAACCATATTTAAGAGTGATGAGATCAAAGATACTTTGGCCCCTGTTGTGCCTTCTTTCTCATCAAGGGGTCCAAATATTGTTACACCTGACATTCTTAAGCCAGATTTAGTGGCTCCTGGAGTTGCCATTCTAGCTAGTTGGTCTCCTATTTCCCCTCCTTCTGATATTGAAGGTGATAACAGAACATTACAGTTCAATATCATCTCAGGGACATCAATGGCTTGCCCACATGTTTCTGGGGCAGCAGCTTACATCAAATCATTTCATCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACTACAGCTAAACAGCTTAGCCCCAAGAATAACCGTGACAAAGAATTTGCATATGGCGCAGGCCAAATTGATCCTTCCAAGGCTATTTATCCTGGTTTAATATATGATGCTGGTGAAATAGACTATGTAAGGTTTTTATGTGGACAAGGCTATAGTTCAAAGACTTTAAAATTCATCACAGGGGATAATAGTAGCTGCCCTGAAACAACTTATGGTACAGCAAGGGATCTGAACTATCCTTCATTTGCTCTTCATGTCCCACCCTCCAATTCCACTGTAAGTGGAAGTTTTAATAGGACTGTTACAAATGTTGGTTCACCAACGTCCACATATGAAGCTATTGTGACTAATCCTCAAGGACTAAAAATTGAAGTGAACCCCAAGGTTCTGTCATTCACTTCTCTTGACCAAAAGAAAACATTTGTGCTCACAATTGAGGGAACATTAGAAGAATCTGTAGTGTCAGCCTCTTTGGTCTGGGATGATGGTAAACACCAAGTGAGGAGCCCCATTATTGTGTTTAATACACCATAA 2211 0.4184 MDCRRSSALFLFLLCFTSFLLICHSTPQPPLKSYIVYTGDSMKDEASALTLYTSMLQEVVDSKAESRSVLHHYKRSFGGFVVELTEEEAERMAGLDGVVSVFPNEKKQLLTTRSWDFIGFPLQAQRAATESNVIIGLLDSGIWPESESFNDKGFSPPPSKWKGTCQTTNFTCNNKIIGAKYYRADGSFSDEDLKSPRDSDGHGTHTASTAAGNPVSTASMLGLAQGTARGGAISARIAVYKVCWFDGCFDADILAAFDDAIADGVDIISVSIGGFTDSNYFKDVLGIGAFHAVRSGILTVTSAGNGGPRPSSLSNFTPWSISVGASTIDRKFVTKVELGDNRTYEGISVNSFDLKGELYPIIYAGDAPNTKGGYDGSTSRFCFDDTLDENLVKGKIVLCDIRSKAAGPFYAGAVGALIQGQTSRDLTPSLPLAGSYLDLHDGLSVYDYINSTRTPNATIFKSDEIKDTLAPVVPSFSSRGPNIVTPDILKPDLVAPGVAILASWSPISPPSDIEGDNRTLQFNIISGTSMACPHVSGAAAYIKSFHPTWSPAAIRSALMTTAKQLSPKNNRDKEFAYGAGQIDPSKAIYPGLIYDAGEIDYVRFLCGQGYSSKTLKFITGDNSSCPETTYGTARDLNYPSFALHVPPSNSTVSGSFNRTVTNVGSPTSTYEAIVTNPQGLKIEVNPKVLSFTSLDQKKTFVLTIEGTLEESVVSASLVWDDGKHQVRSPIIVFNTP 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi816g00004 736 MobiDBLite consensus disorder prediction 192 212 - -
Sebi816g00004 736 Pfam Fibronectin type-III domain 635 732 IPR041469 -
Sebi816g00004 736 Gene3D - 605 734 - -
Sebi816g00004 736 SUPERFAMILY Subtilisin-like 109 591 IPR036852 GO:0004252|GO:0006508
Sebi816g00004 736 CDD PA_subtilisin_like 336 459 - -
Sebi816g00004 736 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Sebi816g00004 736 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Sebi816g00004 736 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Sebi816g00004 736 ProSiteProfiles Serine proteases, subtilase domain profile. 114 588 - -
Sebi816g00004 736 FunFam Subtilisin-like protease SBT1.5 132 346 - -
Sebi816g00004 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Sebi816g00004 736 Gene3D - 329 466 - -
Sebi816g00004 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 732 IPR045051 -
Sebi816g00004 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 109 IPR037045 -
Sebi816g00004 736 Pfam Subtilase family 131 580 IPR000209 GO:0006508|GO:0008236
Sebi816g00004 736 CDD Peptidases_S8_3 107 562 IPR034197 -
Sebi816g00004 736 Gene3D Peptidase S8/S53 domain 132 601 IPR036852 GO:0004252|GO:0006508
Sebi816g00004 736 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi816g00004 Sebi-Chr816 114837 119704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi816g00004 52 734 Subtilisin-like Serine Gene Family AT5G59190 49.639 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi816g00004 - - gmx:100795826 1166.76