Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi815g00012 ATGTGCATTGAATGTGAAGATCTTGGTTGTGGTTTATGGTGTTTGAATAGGAAAAGGAGGGTGTGGCTTGGGACATTTGAAACTGCTGAAGAAGCAGCAAGAGCATATGATGAGGCAGCAATTTTGATGAGTGGAAGAAATGCCAAAACTAACTTCCCAGTTGCTGATAATCAAAAGGGCAATCACAATTCTACTTCATCCTTTTCCAATACATTTTCTGCAGTTCTCAGTGCAAAGCTCAGGAAGTGTTGTAAGTCCCCTTCACCTTCCCTCACTTGTCTAAGGCTTGATGCAGAGAATTCCCACTTTGGGGTATGGCAGAAGAGAGCAGGGCCTCATTCTGAATCAAACTGGATCATGATGGTTGAATTGGAAAGGAAAAATAATGGAACTTCTTCTGATTCAGAATTGTCACTGCCAGAGACTCCAGAGAAAGTAATAAAACCAAAGGAAAATAACAATGGTTTGGAAGAGGAGCAGAGGATTGCCTTGCAGATGATAGAAGAACTTCTAAATAGGAATTAG 525 0.4095 MCIECEDLGCGLWCLNRKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVADNQKGNHNSTSSFSNTFSAVLSAKLRKCCKSPSPSLTCLRLDAENSHFGVWQKRAGPHSESNWIMMVELERKNNGTSSDSELSLPETPEKVIKPKENNNGLEEEQRIALQMIEELLNRN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi815g00012 174 Coils Coil 153 173 - -
Sebi815g00012 174 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 17 128 - -
Sebi815g00012 174 CDD AP2 12 55 IPR001471 GO:0003700|GO:0006355
Sebi815g00012 174 ProSiteProfiles AP2/ERF domain profile. 1 53 IPR001471 GO:0003700|GO:0006355
Sebi815g00012 174 Pfam AP2 domain 13 44 IPR001471 GO:0003700|GO:0006355
Sebi815g00012 174 Gene3D AP2/ERF domain 9 55 IPR036955 GO:0003700|GO:0006355
Sebi815g00012 174 SMART rav1_2 10 59 IPR001471 GO:0003700|GO:0006355
Sebi815g00012 174 SUPERFAMILY DNA-binding domain 16 54 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi815g00012 Sebi-Chr815 286287 286811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi815g00012 18 174 AP2-EREBP Transcription Factor Family AT1G15360 54.598 2.60e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi815g00012 AP2 1.4e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi815g00012 - - gmx:100796962 224.557