Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi815g00009 ATGGCATCACATATCATATTCACTGTGAAAGATGACAATCCTATTGGGGCGACCTTAATTGGAAGGGCATATGTGCCTGTCAAGGAGGTCTTGGATGACCGCAACTGGGGTCTAGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATACTTTCTGCTCTCAAAGACAAGGATGCTGGTCTGTTTATACTGAGATTACCTTGGTAAGGGATTCTATGAGGCCAAAGCCTGGAGGAGACACAACACTTGGTGAGCTTCTCAAGAAGAAAGCAAAGGATGGTGTCAGGGTTTTAATGCTTGTTTGGGATGATAGAACATCAATTCCATTGATAAAAAAACATGGTTATATGGGTACTCATGATGAAGAAACCGAGGGGACCATAGAAATTGCCACCATGTTTACTCATCACCAGAAAATTGTGGTAGTGGACAGTGAGTTGCCAAGTGGAGGTACAGATAAGAGAAGAATTGTGAGTTTTGTAGGGGGCATTGATCTCTGTGATGGAAGATATGATACTCCATTTCATTCACTTTTCAGAACACTGGACACGGCACATCATGATGATTTTCCTCAGATTAACTTTCCTGGTGCTTCAATTAAAAAAGGTGGTCCCAGGGAACCTTGGCATGACATCCACTCTCCGCTTGAAGGGCCCGTTGCTTGGGATGTTTGTATAACTTTGAGCAGAGATGGAGGAAGCAAGTTATTTAGATCTATTGATGGTGGAGCAGCTTATGGGTTCCCAGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTTGTTAGTGGGAAGGATAATATAATAGATCGCAGTATTCAAGATGCTTACATTAATGCTATTCGACGTGCAAAGAATTTCATCTACATTGAAAATCAGTATTTCCTTGGAAGCTGTTATGACTGGAGTCCTGATGGTATTAAGCCTGAAGATATTGAGGGTGAGCCAGAAGGTGGATCTGTTCAGGCAATATTGGACTGGCAGAGGAGAACAATGGATATGATGTACAAGGATGTTGTTCAGGCACTCAATGCCAAGGGAATTGATGACGATCCTCGGAACTATTTGACATTCTTCTGCCTTGGCAACCGTGAGGTGAAGAAACAAGGAGAGTATGAGCCTTCAGAAAGACCAGAACCTGATTCAGATTATATGAGAGCCCAAGAGGCCAGACGCTTCATGATTTATGTCCATGCAAAGATGATGATAGAGACTCTGAGATTGCCATGGGTGCTTATCAGCCCTATCATTTGGCTACCAGGCAGCCTGCAAGGGGTCAGATCCATGGTTTCCGAATGTCATTGTGGTATGAGCACCTTGGCATGCTTCATGACTCCTTCCTCCACCCAGAAAGTGAAGAGTGTATTAGGAAGGCCACCTGCTCGCTATCCTGTTGGGATTTCTAGCGAAGGAAAAGTCACAGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTAGTGTTCATGGCCACAAAGATGACTACCTACCACCCATTCTTACTACTTAG 1509 0.4414 MASHIIFTVKDDNPIGATLIGRAYVPVKEVLDDRNWGLGIRSPKFPGVPYTFCSQRQGCWSVYTEITLVRDSMRPKPGGDTTLGELLKKKAKDGVRVLMLVWDDRTSIPLIKKHGYMGTHDEETEGTIEIATMFTHHQKIVVVDSELPSGGTDKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFPQINFPGASIKKGGPREPWHDIHSPLEGPVAWDVCITLSRDGGSKLFRSIDGGAAYGFPETPEDAAKAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYDWSPDGIKPEDIEGEPEGGSVQAILDWQRRTMDMMYKDVVQALNAKGIDDDPRNYLTFFCLGNREVKKQGEYEPSERPEPDSDYMRAQEARRFMIYVHAKMMIETLRLPWVLISPIIWLPGSLQGVRSMVSECHCGMSTLACFMTPSSTQKVKSVLGRPPARYPVGISSEGKVTELPGFEFFPDTKASVHGHKDDYLPPILTT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi815g00009 502 SUPERFAMILY Phospholipase D/nuclease 81 231 - -
Sebi815g00009 502 Pfam Phospholipase D Active site motif 132 170 IPR001736 GO:0003824
Sebi815g00009 502 SUPERFAMILY Phospholipase D/nuclease 260 402 - -
Sebi815g00009 502 SMART pld_4 132 170 IPR001736 GO:0003824
Sebi815g00009 502 Gene3D Endonuclease Chain A 72 230 - -
Sebi815g00009 502 Pfam Phospholipase D C terminal 461 491 IPR024632 -
Sebi815g00009 502 PANTHER PHOSPHOLIPASE D 235 302 IPR015679 -
Sebi815g00009 502 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 132 170 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi815g00009 Sebi-Chr815 226875 229318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi815g00009 1 502 Phospholipase D Gene Family (Wang group) AT3G15730 50.894 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi815g00009 K01115 - gmx:100784434 671.003