Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi815g00003 ATGATGGGCTTGTTCAGATGTGGAACCTTGCTTTTCTATGTGCTACTTCTGTTTAGAACCTGCCAAGCCAAGGATCAACACATTAGCCAGATATATCCTGGTTTCAGTGCATCTAGGCTAGATTGGAATGACCATGGTGGGTTCTTCTTGCTATCTAACAGCTCAGCTTTTGCTTTTGGATTCTTCACTGCCTTGGATGTTTCATTGTTTGTTTTAGTGGTCATTCACTTGAGTAGCTATAAAGTGGTTTGGACTGCCAATAGAGGCTTGCTTGTTAGAAATTCTAATAGATTTGTGTTTGACCATAATGGGAATGCATATTTGGAAGGTGGGAATGGTATGGTTTGGGCAACTAATACAACAGGACAAAAAGTGAGATCCATGGAATTGCTTGATTCAGGGAATTTGGTGTTACTTGGGGAAAATGGGACAGCTATTTGGGAGAGTTTTAGCCATCCCACTGATACTCTTTTGCCTGGTCAAGCTTTTGTGGAAGGAATGACAATGAAAAGCTTCCGCAACAGCATGAACTTGTTTCATTATCTTGGTTATATAGCAGGTGACTTGGTTCTCTATGTTGGATTTGTACCTACACAACCTTACTGGTTCCTATCAGGGGAAACCCTGAGAACTCCAAACAATGTCACTGGTAAGGTTCACTCTGCTTCTCTAGTGTCCAATTCATGGAATTTTTATGACAAAAATGGAGCTTTGCTATGGAAAATTGTGTTCTCTGACCATTCAGATCCTAAGTCAATGTGGGCTGCTATTTTGGATCCAAATGGTGTTATCTCTTTCTATGATCTTAACAAGGGAAGATCTGCTAACCCTGAAGCAATGAAAATTCCACAAGACCCTTGTGGCATTCCTGAGCCTTGTGATCCTTACTATGTTTGTTTCTTTGAAAATTGGTGTGAATGCCCTGCACTTCTCAAATCTCGTTTTAATTGCAAGCCTCCAAACATCTCAACTTGTTCTAGAAGCTCAAAAACAGAACTTTTATATGTTGGTGAAGAGCTTGATTATTTTGCACTTAAGTATGTTGCACCAGTTTCAAAATCAACCTTGAGTGCTTGCAAAGATTCTTGTTTAGGAAACTGCTCTTGCCTTGTGCTTTTCCATGAAAACAGTACTGGTAGATGCTTTCATTTTGATCAGACTGGGAGTTTCCAACGCTTTAAGGGTAACACAAGTGGTTATGTTTCATACATGAAGGTCTCCATTGATGAAGGAAATGGTAACAAAATTGGAAGGAAGAACTTGCTTCTAATTATCTTCATGGTAATTCTTACAGTTCTGGTTATAGTTGGTCTTATAACAGGATATAGGTACTACATGAAGAAGGATAAGAATTTTGAAGGGTACCCTCAAGACACCTTGGAGGAAGATGATTTCTTTGATAGTCTCTCTGGGATGCCTGCACGTTTTACTTATAGTGCTCTTGCAAGAGCAACTAAGGACTTCTCCACAAAAATTGGTGAAGGTGGTTTTGGCTCAGTGTATCTAGGTGTACTTGAAGATGGCACACAATTGGCTGTGAAAAAATTGGAAGGGGTTGGACAAGGGGCAAAAGAGTTCAAAGCTGAAGTGTCCATAATTGGAAGTATTCACCATGTTCATTTGGTAAAGCTGAAAGGGTTTTGTGCTGAAGGTCCTCATCGCCTTCTTGTTTATGAATACATGGCAAGGGGTTCTTTGGATAAATGGATCTTCAAGAACAGTGAAAACAATTTCTTGTTGAATTGGGACACGAGGTACAACATTGCAATAGGCACTGCAAAAGGGTTGGCCTATCTTCATGAGGAGTGTGAAGTGAGGATTATTCACTGTGATATTAAACCACAAAATGTTCTTCTTGATGATAATTTCATGGCTAAAGTTTCTGATTTTGGATTGGCTAAGCTAATGAGCAGAGAACAAAGCCATGTTTTTACAACTCTAAGAGGCACAAGAGGATATCTAGCTCCAGAATGGATTACTAACTATGCAATTTCAGAGAAGAGTGATATATACAGCTATGGCATGGTTTTGCTTGAGATTATTGGAGGAAGGAAGAACTATGATCAATGGGAAGGGTCAGAGAAAGCACATTTTCCTTCTTATGTGTTCAGAATGATGGAAGAAGGAAAAGTGAAGGAGGTTTTTGACCAAAAGATAGATATTGATGAGAAGGATGAAAGAGCTGTGACTGCTCTTAAGGTTGCTCTTTGGTGTATACAAGATGATGTGAGTTTGAGGCCTTCTATGACTAAGGTAGTTCAAATGCTTGAAGGTTTGTGCCCTGTACCTGATCCTCCTTCATTGTCTCATTCCACTACTTACTCAGCTTTCTTGAAAATTAGTGGAGAAGCTACTTCATCTAGTTTTTATAGTAATGTACCCTTGTCTTGTGTTCAGTTATCAGGACCTAGATGA 2415 0.3946 MMGLFRCGTLLFYVLLLFRTCQAKDQHISQIYPGFSASRLDWNDHGGFFLLSNSSAFAFGFFTALDVSLFVLVVIHLSSYKVVWTANRGLLVRNSNRFVFDHNGNAYLEGGNGMVWATNTTGQKVRSMELLDSGNLVLLGENGTAIWESFSHPTDTLLPGQAFVEGMTMKSFRNSMNLFHYLGYIAGDLVLYVGFVPTQPYWFLSGETLRTPNNVTGKVHSASLVSNSWNFYDKNGALLWKIVFSDHSDPKSMWAAILDPNGVISFYDLNKGRSANPEAMKIPQDPCGIPEPCDPYYVCFFENWCECPALLKSRFNCKPPNISTCSRSSKTELLYVGEELDYFALKYVAPVSKSTLSACKDSCLGNCSCLVLFHENSTGRCFHFDQTGSFQRFKGNTSGYVSYMKVSIDEGNGNKIGRKNLLLIIFMVILTVLVIVGLITGYRYYMKKDKNFEGYPQDTLEEDDFFDSLSGMPARFTYSALARATKDFSTKIGEGGFGSVYLGVLEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENNFLLNWDTRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFMAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDIYSYGMVLLEIIGGRKNYDQWEGSEKAHFPSYVFRMMEEGKVKEVFDQKIDIDEKDERAVTALKVALWCIQDDVSLRPSMTKVVQMLEGLCPVPDPPSLSHSTTYSAFLKISGEATSSSFYSNVPLSCVQLSGPR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi815g00003 804 PIRSF SRK 1 800 IPR024171 GO:0004674
Sebi815g00003 804 Pfam D-mannose binding lectin 82 163 IPR001480 -
Sebi815g00003 804 CDD PAN_AP_plant 323 407 - -
Sebi815g00003 804 ProSitePatterns Protein kinases ATP-binding region signature. 492 515 IPR017441 GO:0005524
Sebi815g00003 804 Gene3D - 45 152 IPR036426 -
Sebi815g00003 804 ProSiteProfiles Bulb-type lectin domain profile. 35 151 IPR001480 -
Sebi815g00003 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 170 IPR036426 -
Sebi815g00003 804 SUPERFAMILY Protein kinase-like (PK-like) 469 757 IPR011009 -
Sebi815g00003 804 SMART blect_4 41 153 IPR001480 -
Sebi815g00003 804 CDD STKc_IRAK 492 759 - -
Sebi815g00003 804 FunFam S-receptor-like kinase 5 561 765 - -
Sebi815g00003 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 767 - -
Sebi815g00003 804 Gene3D Transferase(Phosphotransferase) domain 1 561 762 - -
Sebi815g00003 804 Pfam Protein kinase domain 489 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi815g00003 804 SMART serkin_6 486 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi815g00003 804 FunFam serine/threonine-protein kinase PBS1-like 455 560 - -
Sebi815g00003 804 Gene3D Phosphorylase Kinase; domain 1 457 560 - -
Sebi815g00003 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Sebi815g00003 804 CDD B_lectin 46 153 IPR001480 -
Sebi815g00003 804 ProSiteProfiles Protein kinase domain profile. 486 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi815g00003 Sebi-Chr815 58292 60706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi815g00003 430 766 Receptor kinase-like Gene Family AT5G20050 44.818 2.63e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi815g00003 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi815g00003 - - gmx:100786024 1352.04