Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi812g00005 ATGTCTTTCAACATGATGATACAATTTGTAGCGAAGGACTTTTGGACTGCTCAGAAGAAAGTGGCAGAGATAATGAAAGGAAGGATCCTTGTTGGTCATGCCTTGCAGAATGATCTCAAGGCATTATTATTAAGTCATCCCAAAAAGGATATACGGGATACCTCCGAGTACCAACCCTTTTTGAAGTCAAGTAGCAGAAAAGCATTGCGGCATCTCGCCGCAGAACATCTTGGTGTTAAGATCCAAACAGGAGAGCACTGCCCTGTAGAAGATGCCCGTGCTGCCATGCTGCTTTACCAAAGAAATAGAAAAGAATGGGATAAGAGCATAAAAGATCAATTTCGGTTAAAACAGAAGCAAAGGAAACGGAAGCAGAAAAAGAAGCAAAAGAATGAAGATGCTTCAACTGTCAACCACACTGGAATTGAATCATAG 435 0.4138 MSFNMMIQFVAKDFWTAQKKVAEIMKGRILVGHALQNDLKALLLSHPKKDIRDTSEYQPFLKSSSRKALRHLAAEHLGVKIQTGEHCPVEDARAAMLLYQRNRKEWDKSIKDQFRLKQKQRKRKQKKKQKNEDASTVNHTGIES 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi812g00005 144 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 16 123 IPR047021 GO:0004527
Sebi812g00005 144 MobiDBLite consensus disorder prediction 110 144 - -
Sebi812g00005 144 Gene3D - 4 128 IPR036397 GO:0003676
Sebi812g00005 144 SUPERFAMILY Ribonuclease H-like 11 100 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi812g00005 Sebi-Chr812 139755 140654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi812g00005 17 103 C2H2 Transcription Factor Family AT5G40310 41.176 5.72e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi812g00005 K18327 - gmx:100811497 202.216