Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi810g00014 ATGAAACAGAACATGAATGTTACAGATTTGACCACAAATCCAAAGGTGCAAGGAAAAAGTGGAGATTTTAGTACCAATAGTATCACTTCTCCTAATTTTGCTGGTAGTCCTTGTATTGTATCATTTAAGCTTCTCAAAACCTCCACTGGGAACGGACCAGAGTTCATCAATGAAGTTGGAACAATGGGTCAAATTCATCATGTCAATGTGGTTCGCTTAGTTGGCTTTTGCGCAGATGGACACACACGTGCTCTAGTATATGAGTACTTGCCAAATGGGTCATTGCAGAAATTCATATCCACAACAGATTTTAAAAACCATTTCCTGAGCTGGGAGAAGCTGCAAGAAATTGCTCTTGGAATAGCCAAAGGGATTGAGTATCTTCATCAAGGGTGTGACCAGAGGATCCTACACTTTGATATTAAACCCCACAATATCTTACTTGACCACCATCTTACTCCTAAGATATCTGATTTTGGTTTGGCTAAGTTGTGTTCTAAGGATCAAAGTGCAGTTTCCATGACTGCTGCTAGGGGAACTGTAGGCTATATAGCACCTGAAGTGTTCTCTAGGAACTTTGGGAATGTGTCATATAAGTCTGATGTGTATAGTTTTGGAATGTTATTGCTTGAGATGGTTGGAGGAAGACAGAATGTTGATGTAACTGCAAAGAAAAGTGGTCTAGGCTACTTCCCAGAGTGGATTTACAATCTATTAGAACAAGGGGATGATCTGAGGGAACACATTGAGGTAGAGAAATATGCTAAAATAGCTAAGAAGCTTGCAATTGTGGGACTCTGGTGCATTCAATGGCACCCAGTTGATCGTCCTTCTATGCAAGTTGTGGTTCATATGTTGGAAGGAGATGGAGACAATTTAAGTATGCCACCCAATCCATTTGCTTCTGCAGATCCAATTATAATGAATGTGAATATGTTTGGGAGGCAGCTTACTAGGAACTAA 963 0.4019 MKQNMNVTDLTTNPKVQGKSGDFSTNSITSPNFAGSPCIVSFKLLKTSTGNGPEFINEVGTMGQIHHVNVVRLVGFCADGHTRALVYEYLPNGSLQKFISTTDFKNHFLSWEKLQEIALGIAKGIEYLHQGCDQRILHFDIKPHNILLDHHLTPKISDFGLAKLCSKDQSAVSMTAARGTVGYIAPEVFSRNFGNVSYKSDVYSFGMLLLEMVGGRQNVDVTAKKSGLGYFPEWIYNLLEQGDDLREHIEVEKYAKIAKKLAIVGLWCIQWHPVDRPSMQVVVHMLEGDGDNLSMPPNPFASADPIIMNVNMFGRQLTRN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi810g00014 320 Gene3D Transferase(Phosphotransferase) domain 1 94 294 - -
Sebi810g00014 320 Gene3D Phosphorylase Kinase; domain 1 17 93 - -
Sebi810g00014 320 ProSiteProfiles Protein kinase domain profile. 1 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi810g00014 320 SMART serkin_6 12 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi810g00014 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Sebi810g00014 320 FunFam PR5-like receptor kinase 90 297 - -
Sebi810g00014 320 PANTHER RUST RESISTANCE KINASE LR10-RELATED 39 302 IPR045874 GO:0004672
Sebi810g00014 320 SUPERFAMILY Protein kinase-like (PK-like) 39 287 IPR011009 -
Sebi810g00014 320 Pfam Protein kinase domain 40 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi810g00014 Sebi-Chr810 186891 188530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi810g00014 40 305 Receptor kinase-like Gene Family AT1G66910 53.506 2.88e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sebi810g00014 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi810g00014 - - qsu:111992996 446.432