Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi810g00009 ATGAAGAACCCCAAACGCCACCCGCCGGAGTCATCTCTCCGGCGTGTGGCCTCCGACGAGAATGTCAAGGGTTTCAAGAATGCTCGCCGGAGGAGACTCAAAATCCGGCGAGTGAAGTACAGCTGCCAGGCGAAGATCCACGTCGGAAATGGCGCCGGCGGCGAAGCTCGTCCGTCTCCGGAGGAGACAAAGGTCTTCGGCTCGGAGAATGAGCAAAGGGAGATTCACGAAGCCGTGGAGATATCGCTGTCGCTGGCGTCGACGTCGTCATCGGAGGAGGAGGATCGGTCGTCGACGGGAAACGACGCCGTTTTGTCGTATGGTTCGGTGTCGGTGATAGGGAAGAGGAAGGAGATGGAGGACGCGGTGAGCGTGGAGATAGGGCTTGTTGCAAAGGAGAGAGCAAAGTGTGACTTCTTCGCCGTATACGACGGTCACGGCGGAGCTCAGGTGGCGCTAGCTTGCCGTGAGCGGTTGCACCGACTAGTTGCAGAGGAGGTGGAGAGGTGCGTGGATGAGGTGGAGTGGGACTGGGAGGAAATGATGGAAGGGTGTTTCCGTAAAATGGATAGTGAGGTAGCGGATAATGCGGCGGTGAGGACAGTCGGTTCCACGGCGGTTGTGGCCGTTGTAGCCGCGAAGGAGGTGGTCGTCGCTAATTGCGGCGACTCTAGGGCTGTGATGGGAAGAGGAGGTAAAGCCGTGGACTTGTCTAGTGATCATAAGCCCGACAGGCCTGATGAATTGATGCGAATCGAAGAAGCTGGTGGAAGGGTCATAAACTGGAATGGCCAGCGCGTTCTGGGTGTTCTTGCCACTTCGCGATCTATAGGAGATCAGTACCTTCGACCTTATGTGATATCAAAGCCAGAAGTAACAGTGACGAAGCGAACCAGCAAGGATGAATTTCTCATACTAGCAAGTGATGGCTTGTGGGATGTCATCTCCAGTGAAGTTGCGTGCCAGGTTGTAAGGAAATGCCTCAGCGGTCAGATTAGGAGAGTTCGTAATGCGGTTGGGAATCAAAGCCGTGCTGCCGAAGCTGCAGCACTCTTGGCTGAGATAGCATTGGCAAAGGGTAGCAGAGATAACACCAGTGTCATCGTAGTGGAGCTACGAGGAACAGTAACATCTAGCTGA 1140 0.5509 MKNPKRHPPESSLRRVASDENVKGFKNARRRRLKIRRVKYSCQAKIHVGNGAGGEARPSPEETKVFGSENEQREIHEAVEISLSLASTSSSEEEDRSSTGNDAVLSYGSVSVIGKRKEMEDAVSVEIGLVAKERAKCDFFAVYDGHGGAQVALACRERLHRLVAEEVERCVDEVEWDWEEMMEGCFRKMDSEVADNAAVRTVGSTAVVAVVAAKEVVVANCGDSRAVMGRGGKAVDLSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTSKDEFLILASDGLWDVISSEVACQVVRKCLSGQIRRVRNAVGNQSRAAEAAALLAEIALAKGSRDNTSVIVVELRGTVTSS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi810g00009 379 Gene3D - 99 376 IPR036457 -
Sebi810g00009 379 ProSiteProfiles PPM-type phosphatase domain profile. 106 372 IPR001932 -
Sebi810g00009 379 Pfam Protein phosphatase 2C 107 365 IPR001932 -
Sebi810g00009 379 PANTHER PROTEIN PHOSPHATASE 89 372 IPR015655 GO:0004722|GO:0006470
Sebi810g00009 379 SMART PP2C_SIG_2 122 372 IPR001932 -
Sebi810g00009 379 MobiDBLite consensus disorder prediction 47 71 - -
Sebi810g00009 379 SMART PP2C_4 96 370 IPR001932 -
Sebi810g00009 379 FunFam Protein phosphatase 2C 51 99 379 - -
Sebi810g00009 379 SUPERFAMILY PP2C-like 99 373 IPR036457 -
Sebi810g00009 379 MobiDBLite consensus disorder prediction 1 26 - -
Sebi810g00009 379 CDD PP2Cc 106 372 IPR001932 -
Sebi810g00009 379 MobiDBLite consensus disorder prediction 1 28 - -
Sebi810g00009 379 ProSitePatterns PPM-type phosphatase domain signature. 139 147 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi810g00009 Sebi-Chr810 131457 134043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi810g00009 38 373 PP2C-type Phosphatase Gene Family AT2G29380 46.089 4.70e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi810g00009 K14497 - gmx:100807235 491.115