Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi810g00001 ATGAATACTACTCAGCAAGAAAAGTTTGTTAGGTTTCAGGATGGTAACGCAGAGAAGGTTTCTGAGAGGAATTATCCTGCAATTAACATAACACACTCGGGGAGATTTAGAACTAAGTTGAGTTCATTTTCTGAGAAGTTCCAAAGGGGATTGGAATCTGGTTCTGAGAAGTTAAAGAGATTCAGGACATCATTTGAATCTTTTCCCTATAAGTATAATGGTGCTTTTTCTAGAAGCTTTGGTTCTAAAAGGAAAATCCTTGATCCACAGGGTCCATTCCTTCAAAAGTGGAACAAGATATTTGTGTTATTATGTGTTATTGCAGTATCACTGGATCCTTTGTTCTTTTATGTCCCTGTGATTGATGATGTGAAGAAATGTCTTTCATTGGACAGCAAGATGGAGATTACAGCAACTGTTTTAAGAACTTTCTCTGATGTTTTATATATAATCCACATGTTTTTCCAGTTTCGTACTGGATTCATTGCTCCCTCTTCTCGAGTATTTGGAAGAGGTGTTCTGGTTGAAGATTCTTGGGCAATAGCCAGGAGGTATTTGTCATCATATTTCTTAGTTGACATTCTTGCGATTCTTCCACTCCCACAG 606 0.3746 MNTTQQEKFVRFQDGNAEKVSERNYPAINITHSGRFRTKLSSFSEKFQRGLESGSEKLKRFRTSFESFPYKYNGAFSRSFGSKRKILDPQGPFLQKWNKIFVLLCVIAVSLDPLFFYVPVIDDVKKCLSLDSKMEITATVLRTFSDVLYIIHMFFQFRTGFIAPSSRVFGRGVLVEDSWAIARRYLSSYFLVDILAILPLPQ 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi810g00001 202 Pfam Ion transport protein 97 201 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sebi810g00001 202 SUPERFAMILY Voltage-gated potassium channels 88 201 - -
Sebi810g00001 202 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 76 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi810g00001 Sebi-Chr810 11191 12081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi810g00001 5 202 Ion Channels AT5G53130 63.819 3.19e-84 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi810g00001 K05391 - gmx:100801032 342.428