Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi80g00059 ATGAAAGACCAAGAAGCGGATTTGGAAGCTGATCTTCCTCCACCTTCTGATATGGAACTTACCTCTTCCACCACCCACATGGACACTGACATGGATCTCTTCTTGGAAGAGGTAGAGAAAGTGATTGAGAAGATCATTTCCAATGGGGCAGATGAAGGGATTTTGGGAAAGGTCATAAAGGAACATGGAAGGGGGAAGGTTCTAGAAAATGTGGTGGAGATACAAGATAGGCATGATGCCGCTAAAGAGTTTAAGAAAAGCTTGTTGGAGCTGCATCAGGTGTTTATGGACATGGTTGTGATGGTAGAAGCACAGGGTGAGAAAATGGATGACATTGAGCACCATGTGCTTCATGCTTCTCACTATGTCAAAGACAAAATCAAGAACCTTCAGACTGCAAAGAAATACCAAAGGAGCAGCAGGAAGTGGATGTGCATTGGGATCATACTTTTCTTGATTTTGATTCTTGTCATTGTCATCCTCATTGCCACCAGTTTCAGGAGTTCTTAA 510 0.4294 MKDQEADLEADLPPPSDMELTSSTTHMDTDMDLFLEEVEKVIEKIISNGADEGILGKVIKEHGRGKVLENVVEIQDRHDAAKEFKKSLLELHQVFMDMVVMVEAQGEKMDDIEHHVLHASHYVKDKIKNLQTAKKYQRSSRKWMCIGIILFLILILVIVILIATSFRSS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi80g00059 169 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 71 133 IPR000727 -
Sebi80g00059 169 CDD SNARE_syntaxin1-like 71 132 - -
Sebi80g00059 169 PANTHER SYNTAXIN 68 155 IPR045242 -
Sebi80g00059 169 Pfam SNARE domain 108 159 IPR000727 -
Sebi80g00059 169 Gene3D - 67 167 - -
Sebi80g00059 169 Pfam Syntaxin 39 106 IPR006011 GO:0016020
Sebi80g00059 169 SMART tSNARE_6 66 133 IPR000727 -
Sebi80g00059 169 MobiDBLite consensus disorder prediction 1 25 - -
Sebi80g00059 169 FunFam Syntaxin 132 64 164 - -
Sebi80g00059 169 SUPERFAMILY t-snare proteins 39 124 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi80g00059 Sebi-Chr80 1856380 1857274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi80g00059 39 169 SNARE and Associated Proteins AT1G08560 66.667 2.56e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi80g00059 K08486 - qsa:O6P43_009794 197.593