Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi80g00053 | ATGGGCGGCATCAGCCTCGAAGAGATTAAAAACGAGAACGTCGATCTGGAACGTATTCCTATAGAGGAGGTGTTTGAGCAGCTGAAATGTTCAAGAGCAGGTCTAACTACAGAGGAAGGAGCCAACCGGCTTCAAGTCTTTGGACCAAACAAGTTGGAAGAGAAAAAAGAGAGCAAGGTTTTGAAGTTCTTGGGTTTTATGTGGAACCCCTTGTCATGGGTCATGGAAGCTGCTGCTATAATGGCCATTGCTTTGGCCAATGGAGGAGGAAGGCCCCCGGATTGGCAGGATTTTGTGGGAATCATTGCTCTGTTAGTGATCAACTCCACAATCAGTTTCATTGAGGAAAACAATGCTGGCAATGCTGCTGCAGCTCTTATGGCTGGTTTAGCTCCCAAGACCAAGGTTCTAAGAGATGGCCGATGGAGTGAACAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAGCATTAAATTGGGAGATATCATTCCAGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTGAGTGTTGATCAGTCTGCTTTAACAGGAGAATCTCTTCCTGTGACAAAGAGTTCCTCTGATGAAGTGTTTTCGGGATCAACTGTTAAGAAGGGTGAGATTGAAGCAGTTGTGATTGCTACTGGGGTGCACACCTTTTTTGGTAAAGCAGCTCATCTTGTGGACAGCACTAACCAAGTTGGACACTTTCAGAAAGTGCTTACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATAATGATTGAGCTCATAGTCATGTACCCAATACAACACCGCAAGTACAGAGATGGAATTGACAATCTTTTGGTTCTCTTGATTGGAGGAATTCCCATTGCCATGCCTACTGTTTTATCTGTCACTATGGCTATTGGTTCTCACAGGCTTTCCCAGCAAGGTGCAATTACAAAAAGAATGACAGCTATTGAGGAAATGGCTGGGATGGATGTCCTCTGCAGTGACAAAACCGGGACTCTCACTCTGAATAAGCTAAGTGTTGATAGAAATTTGATTGAGGTGTTTGCCAAGGGTGTTGAGAAGGAGTATGTTATCCTTCTAGCAGCCAGAGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGGATGCTTGCTGACCCTAAGGAGGCAAGAGCTGGTATCAGGGAGGTCCATTTCCTTCCATTCAATCCTGTAGACAAGAGAACTGCTCTTACCTACATTGATTCTAATGGAAATTGGCATCGGTCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTTTGCAACTGCAAAGAGGATGTCAGGAAAAGGGTTCATGCAGTAATTGATAAGTTTGCTGAGCGTGGACTTCGATCTTTAGGTGTTGCAAGACAGGAAATACCTGAGAAAAATAAAGATAGTCCTGGTGGACCATGGCAATTTGTTGGCCTGCTACCACTGTTTGATCCTCCCAGGCATGATAGTGCTGAAACCATTAGAAGAGCTCTTAACCTTGGTGTGAATGTGAAGATGATCACTGGGGACCAGCTTGCCATCGGCAAGGAAACAGGCAGAAGGCTTGGAATGGGAACAAACATGTACCCCTCATCTGCATTGCTTGGCCAAGACAAGGATGCTTCTATTTCAGCTCTTCCAGTTGACGAGTTGATTGAGAAAGCTGATGGATTTGCAGGAGTATTTCCTGAACACAAATATGAAATTGTGAAGAGGTTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTAAACGATGCCCCTGCATTGAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCCACAGATGCTGCTAGAAGTGCTTCTGATATTGTTCTCACTGAACCTGGTTTGAGTGTCATTATTAGTGCAGTGCTCACCAGCAGGGCAATTTTCCAGAGGATGAAGAATTATACTATTTATGCTGTGTCAATCACCATTCGTATTGTGTTTGGTTTCTTGTTTATTGCGTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTTTTGATTATTGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTTAAACCATCTCCACTGCCTGACAGCTGGAAACTTAGGGAAATCTTTGCCACTGGTGTTGTGTTAGGCAGTTACATGGCACTAATGACAGTAATATTTTTCTGGGCTATGAAAGATACTGACTTCTTCCCGAACAAGTTTGGTGTGAGGTCTTTGAGATATAACCCTGATGAGATGATGGCAGCTTTATACCTACAAGTCAGTATAATAAGCCAGGCACTAATTTTTGTCACTAGGTCCCGCAGCTGGTCTTTTGTTGAAAGACCTGGTCTTCTCCTACTGGGTGCTTTTATGATTGCTCAACTGGTGGCAACTTTTATAGCAGTATATGCTAACTGGGGCTTTGCAAGAATAAAGGGAATGGGATGGGGTTGGGCTGGTGTAATTTGGCTATACAGTTTGGTAACCTATATCCCTCTTGATTTACTCAAATTTGCAATCCGCTATGTTCTGAGTGGGAAGGCTTGGGACAATCTTTTGGAGAACAAGACTGCCTTCACTACAAAGAAAGATTATGGCAAAGAAGAGAGGGAAGCACAATGGGCAGCTGCACAGAGGACACTTCATGGTCTTCAGCCTCCAGAAACCTCTGGCCTTTTCAATGAGAAGAATAGCTATAGGGAGCTTTCAGAGATTGCAGAGCAAGCTAAGAGACGTGCTGAAGTTGCAAGGCTTAGGGAGCTTCATACTCTAAAGGGACATGTTGAGTCAGTGGTGAAGCTGAAGGGACTTGACATTGATACAATTCAGCAGCACTACACAGTTTAA | 2856 | 0.4377 | MGGISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTTEEGANRLQVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKSSSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIMIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSNGNWHRSSKGAPEQILNLCNCKEDVRKRVHAVIDKFAERGLRSLGVARQEIPEKNKDSPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYMALMTVIFFWAMKDTDFFPNKFGVRSLRYNPDEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLGAFMIAQLVATFIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDLLKFAIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSGLFNEKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV | 951 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi80g00053 | 951 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 331 | 337 | IPR018303 | - | |
Sebi80g00053 | 951 | Pfam | Cation transporter/ATPase, N-terminus | 19 | 81 | IPR004014 | - | |
Sebi80g00053 | 951 | Pfam | E1-E2 ATPase | 131 | 308 | - | - | |
Sebi80g00053 | 951 | NCBIfam | HAD-IC family P-type ATPase | 563 | 678 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi80g00053 | 951 | NCBIfam | HAD-IC family P-type ATPase | 101 | 346 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi80g00053 | 951 | Coils | Coil | 902 | 922 | - | - | |
Sebi80g00053 | 951 | PRINTS | H+-transporting ATPase (proton pump) signature | 445 | 463 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi80g00053 | 951 | PRINTS | H+-transporting ATPase (proton pump) signature | 619 | 644 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi80g00053 | 951 | PRINTS | H+-transporting ATPase (proton pump) signature | 760 | 781 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi80g00053 | 951 | PRINTS | H+-transporting ATPase (proton pump) signature | 588 | 604 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi80g00053 | 951 | PRINTS | H+-transporting ATPase (proton pump) signature | 560 | 576 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi80g00053 | 951 | Gene3D | - | 326 | 625 | IPR023214 | - | |
Sebi80g00053 | 951 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 18 | 883 | - | - | |
Sebi80g00053 | 951 | FunFam | Plasma membrane ATPase | 481 | 636 | - | - | |
Sebi80g00053 | 951 | SMART | Cation_ATPase_N_a_2 | 15 | 87 | IPR004014 | - | |
Sebi80g00053 | 951 | Gene3D | - | 341 | 488 | IPR023299 | GO:0000166 | |
Sebi80g00053 | 951 | PRINTS | P-type cation-transporting ATPase superfamily signature | 611 | 623 | - | - | |
Sebi80g00053 | 951 | PRINTS | P-type cation-transporting ATPase superfamily signature | 179 | 193 | - | - | |
Sebi80g00053 | 951 | PRINTS | P-type cation-transporting ATPase superfamily signature | 329 | 343 | - | - | |
Sebi80g00053 | 951 | PRINTS | P-type cation-transporting ATPase superfamily signature | 505 | 515 | - | - | |
Sebi80g00053 | 951 | PRINTS | P-type cation-transporting ATPase superfamily signature | 588 | 607 | - | - | |
Sebi80g00053 | 951 | PRINTS | P-type cation-transporting ATPase superfamily signature | 483 | 494 | - | - | |
Sebi80g00053 | 951 | Gene3D | - | 94 | 815 | - | - | |
Sebi80g00053 | 951 | FunFam | ATPase 4 plasma membrane-type | 573 | 815 | - | - | |
Sebi80g00053 | 951 | CDD | P-type_ATPase_H | 34 | 841 | IPR006534 | GO:0008553|GO:0016020|GO:0120029 | |
Sebi80g00053 | 951 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 34 | 806 | IPR006534 | GO:0008553|GO:0016020|GO:0120029 | |
Sebi80g00053 | 951 | SFLD | p-type atpase | 311 | 639 | IPR044492 | - | |
Sebi80g00053 | 951 | FunFam | Plasma membrane ATPase | 132 | 216 | - | - | |
Sebi80g00053 | 951 | SFLD | Haloacid Dehalogenase | 311 | 639 | - | - | |
Sebi80g00053 | 951 | Gene3D | - | 132 | 216 | - | - | |
Sebi80g00053 | 951 | Gene3D | - | 900 | 951 | - | - | |
Sebi80g00053 | 951 | Pfam | haloacid dehalogenase-like hydrolase | 325 | 602 | - | - | |
Sebi80g00053 | 951 | FunFam | Plasma membrane ATPase | 341 | 488 | - | - | |
Sebi80g00053 | 951 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 14 | 847 | IPR023298 | - | |
Sebi80g00053 | 951 | SUPERFAMILY | Calcium ATPase, transduction domain A | 132 | 229 | IPR008250 | - | |
Sebi80g00053 | 951 | SUPERFAMILY | HAD-like | 325 | 635 | IPR036412 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi80g00053 | Sebi-Chr80 | 1620582 | 1628340 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi80g00053 | 4 | 951 | Primary Pumps ATPases | AT2G07560 | 83.439 | 0.0 | 1630 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi80g00053 | K01535 | - | gmx:100791692 | 1771.9 |