Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi80g00051 ATGCACTTTTGTGCAGCAGAACACATTCCAATAGAGGAGGTGTTTGACCAGCTGAAATGTTCAAGAGAAGGTCTAACATCAGATGAAGGATCCAACAGGCTTGAAGTCTTTGGACCAAACAAGTTGGAAGAGAAAAAGGAGAGTAAAGTTTTGAAGTTCTTGGGTTTTATGTGGAACCCCTTGTCATGGGTCATGGAAGCTGCTGCTATAATGGCCATTGCTTTGGCCAATGGAGGAGGAAGGCCCCCAGATTGGCAAGATTTTGTTGGAATCATCACTCTCTTAGTGATAAACTCCACAATCAGTTTCATTGAGGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGTTTAGCTCCCAAGACCAAGGTGCTAAGAGATGGAAGATGGAGTGAACAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAGCATTAAATTGGGAGATATCATTCCAGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTGAGTGTTGATCAGTCTGCTTTAACAGGAGAATCTCTTCCTGTGACAAAGAGTTCCTCTGATGAAGTGTTTTCAGGATCAACTGTTAAGAAGGGTGAGATTGAAGCAGTTGTGATTGCTACTGGGGTGCACACCTTTTTTGGTAAAGCAGCACATTTGGTAGACAACACTAACCAAGTTGGACACTTTCAAAAAGTGCTTACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATAATCATTGAGCTTATAGTCATGTACCCAATACAGCACCGTAAGTACAGAGATGGAATTGACAATCTTTTGGTTCTCTTGATTGGAGGAATTCCCATTGCCATGCCAACTGTTTTGTCTGTCACTATGGCTATTGGTTCTCACAGGCTTTCCCAGCAAGGTGCAATTACAAAAAGAATGACAGCTATTGAGGAAATGGCTGGGATGGATGTCCTCTGCAGTGATAAAACTGGGACTCTCACTTTGAATAAGCTAAGTGTTGATAAAAACTTGATTGAGGTGCTTGTTAAGGGTGTTGAGAAGGACCATGTTGTTCTTTTAGCAGCCAGAGCTTCAAGGACTGAGAATCAGGATGCTATAGATGCTGCTATTGTTGGGATGCTTGCTGACCCTAAGGAGGCAAGAGCTGGTATCACAGAGGTCCATTTCCTTCCATTCAATCCTGTAGACAAGAGAACTGCTCTTACCTACATTGATTCAAATGGAAATTGGCATCGAGCTAGCAAAGGTGCTCCTGAGCAGATATTGAGCCTTTGCAACTGCAAAGAGGGTGTCAAGAAAAAGGTTCATGCAATAATTGATCAGTTTGCTGACCGTGGACTTAGGTCTTTAGGTGTTGCAAGACAGGAAATACCTGAGAAAGATAAAGATAGTCCTGGTGGACCATGGCAATTTGTTGGCCTGCTACCACTGTTTGATCCTCCCAGGCATGATAGTGCTGAAACCATTAGAAGAGCTCTTATCCTTGGTGTGAATGTGAAGATGATCACTGGGGACCAGCTTGCCATTGGCAAGGAAACAGGTAGAAGGCTTGGAATGGGAAGCAACATGTACCCCTCATCTGCATTGCTTGGCCAAGACAAGGATACTTCTACTATTTCAGATCTTCCTATTGATGAGTTGATTGAAAAGGCTGATGGATTTGCTGGAGTATTTCCAGAACACAAATATGAAATTGTCAGGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTAAATGATGCCCCAGCATTGAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACTGAACCTGGTCTGAGTGTCATTATTAGTGCTGTGCTCACCAGCAGAGCAATTTTCCAGAGGATGAAGAATTATACTATTTATGCTGTGTCAATCACCATTCGTATTGTGTTTGGTTTCTTGTTTATTGCATTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTCTTGATTATTGCCATCCTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTTAAACCATCTCCAAAGCCTGACAGTTGGAAACTGAAAGAAATCTTTGCTACTGGTATTGTGTTAGGCAGTTACATGGCACTAATGACAGTTATATTTTTCTGGGCAATGAAAGATACCAGCTTCTTCTCGGACAAGTTTGGTGTGAGGTCTCTGAGATATAGCCCTGAAGAGATGATGGCTGCTTTGTACCTACAAGTCAGTATCATAAGCCAGGCACTAATTTTTGTGACTAGGTCTCGCAGCTGGTCTTTTCTTGAAAGACCTGGTCTTCTCCTAGTTGGTGCTTTTATAATTGCTCAGCTGATAGCAACTTTTATAGCAGTATATGCTAACTGGGGCTTTGCAAGAATAAAGGGAATGGGATGGGGTTGGGCTGGTGTGATCTGGTTGTACAGTTTGGTAACCTATATCCCTCTTGATATACTCAAATTTGCAATCCGCTATTTTCTGAGTGGGAAGGCTTGGGATAATATTTTGGAGAACAAGACTGCCTTCACTACAAAGAAAGACTATGGCATAGAAGAGAGGGAAGCACAATGGGCAGCTGAACAGAGGACACGTCATGGTCTTCAGCCTCCAGATACCTCCAATCTTTTTGATGACAAGAGTAGCTATAGGGAGCTTTCAGAGATTGCAGAGCAAGCTAAGAGACGTGCTGAAGTTGTAAGGCTTAGGGAACTTCATACTCTAAAGGGACATGTTGAGTCAGTGGCGAAGCTGAAGGGGCTTGACATTGATACGATTAATCATCACTATACAGTTTAA 2829 0.4256 MHFCAAEHIPIEEVFDQLKCSREGLTSDEGSNRLEVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKSSSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKVLTAIGNFCICSIAVGIIIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVLVKGVEKDHVVLLAARASRTENQDAIDAAIVGMLADPKEARAGITEVHFLPFNPVDKRTALTYIDSNGNWHRASKGAPEQILSLCNCKEGVKKKVHAIIDQFADRGLRSLGVARQEIPEKDKDSPGGPWQFVGLLPLFDPPRHDSAETIRRALILGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSALLGQDKDTSTISDLPIDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPKPDSWKLKEIFATGIVLGSYMALMTVIFFWAMKDTSFFSDKFGVRSLRYSPEEMMAALYLQVSIISQALIFVTRSRSWSFLERPGLLLVGAFIIAQLIATFIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDILKFAIRYFLSGKAWDNILENKTAFTTKKDYGIEEREAQWAAEQRTRHGLQPPDTSNLFDDKSSYRELSEIAEQAKRRAEVVRLRELHTLKGHVESVAKLKGLDIDTINHHYTV 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi80g00051 942 FunFam ATPase 4 plasma membrane-type 563 806 - -
Sebi80g00051 942 CDD P-type_ATPase_H 24 832 IPR006534 GO:0008553|GO:0016020|GO:0120029
Sebi80g00051 942 PRINTS P-type cation-transporting ATPase superfamily signature 169 183 - -
Sebi80g00051 942 PRINTS P-type cation-transporting ATPase superfamily signature 495 505 - -
Sebi80g00051 942 PRINTS P-type cation-transporting ATPase superfamily signature 579 598 - -
Sebi80g00051 942 PRINTS P-type cation-transporting ATPase superfamily signature 319 333 - -
Sebi80g00051 942 PRINTS P-type cation-transporting ATPase superfamily signature 602 614 - -
Sebi80g00051 942 PRINTS P-type cation-transporting ATPase superfamily signature 473 484 - -
Sebi80g00051 942 ProSitePatterns E1-E2 ATPases phosphorylation site. 321 327 IPR018303 -
Sebi80g00051 942 SMART Cation_ATPase_N_a_2 5 77 IPR004014 -
Sebi80g00051 942 SUPERFAMILY Calcium ATPase, transduction domain A 122 219 IPR008250 -
Sebi80g00051 942 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 839 IPR023298 -
Sebi80g00051 942 NCBIfam plasma-membrane proton-efflux P-type ATPase 24 797 IPR006534 GO:0008553|GO:0016020|GO:0120029
Sebi80g00051 942 Gene3D - 84 806 - -
Sebi80g00051 942 SFLD p-type atpase 301 630 IPR044492 -
Sebi80g00051 942 PRINTS H+-transporting ATPase (proton pump) signature 551 567 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi80g00051 942 PRINTS H+-transporting ATPase (proton pump) signature 610 635 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi80g00051 942 PRINTS H+-transporting ATPase (proton pump) signature 435 453 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi80g00051 942 PRINTS H+-transporting ATPase (proton pump) signature 751 772 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi80g00051 942 PRINTS H+-transporting ATPase (proton pump) signature 579 595 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi80g00051 942 FunFam Plasma membrane ATPase 471 627 - -
Sebi80g00051 942 SUPERFAMILY HAD-like 315 626 IPR036412 -
Sebi80g00051 942 SFLD Haloacid Dehalogenase 301 630 - -
Sebi80g00051 942 Gene3D - 122 206 - -
Sebi80g00051 942 Pfam haloacid dehalogenase-like hydrolase 315 593 - -
Sebi80g00051 942 Pfam Cation transporter/ATPase, N-terminus 8 71 IPR004014 -
Sebi80g00051 942 Gene3D - 891 942 - -
Sebi80g00051 942 Pfam E1-E2 ATPase 121 298 - -
Sebi80g00051 942 PANTHER CALCIUM-TRANSPORTING ATPASE 9 874 - -
Sebi80g00051 942 FunFam Plasma membrane ATPase 122 206 - -
Sebi80g00051 942 FunFam Plasma membrane ATPase 331 478 - -
Sebi80g00051 942 NCBIfam HAD-IC family P-type ATPase 91 339 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi80g00051 942 NCBIfam HAD-IC family P-type ATPase 554 669 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi80g00051 942 Coils Coil 893 913 - -
Sebi80g00051 942 Gene3D - 331 478 IPR023299 GO:0000166
Sebi80g00051 942 Gene3D - 316 616 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi80g00051 Sebi-Chr80 1594653 1600438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi80g00051 7 942 Primary Pumps ATPases AT2G07560 83.120 0.0 1593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi80g00051 K01535 - gmx:100791692 1675.99