Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi80g00026 ATGGCAGTGGAACTCATGGGGTTCCCAAAACTGGACGAACAGAAGGCCATACAAGAGGCGGCATCGGAAGGCCTCAAGGGCATGGAACACCTGATCCGGACCCTCTCCAATCAACCCACTCACTTAAACACTCACCTCACCGATCTCACCGTCTCAAAGTTCAAAAAACTCATCTCCTTACTAAACCGGACCGGTCATGCCCGGTTCAGGCGAGCCCCGGTTCACCCTTCTTCTTCCTCACCCGTCTCAGCCCCGCCGTTCGCTTCTCCGGCGCCGGTCTCCGTCCGCCACGCTCCGGCGAGCTTCGTCCCGGCGCAGCCGCAGAGCATGACGCTCGATTTCACGAAGCCGAACAACAACGTCTTGAGCTCCAACGCTAAATCCATGGAGCTCGAGTTCTCGAAGGAAACAACCACCTTCAGCGTATCCTCCAACTCCTCTTTCATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGATCTTCCTAACGCCGGCGGTAGCTGCTCCGGCGACCTCCGCTGGAAAGCCTCCTCTTTCGTCGGCGCCGTTCACCAAGAAAAGGTGCCATGACCACCGTGAACACTCCGACGACGTTTCCGGCTCCAGCAAGTGCCATTGCATCAAGAGAAGGAAAAACCGGGTGAAGAAAACGGTGAGAGTGCCGGCGATTAGTTCGAAGATAGCCGATATACCGCCAGACGAGTACTCGTGGCGAAAATACGGTCAGAAACCGATCAAGGGGTCGCCGTACCCACGAGGTTATTACAAGTGCAGCACGGTGAGAGGGTGCCCGGCGAGGAAACACGTGGAGCGTGCACCGGATGATCCAGCGATGCTGATCGTTACGTACGAGGGGGAGCACAGGCACGCGCTTCAGGCCGCGATGCAGGAGAACGCAGCCGGGGTTGTGGGTTTGGTGTTCGAGTCAACGTAG 945 0.582 MAVELMGFPKLDEQKAIQEAASEGLKGMEHLIRTLSNQPTHLNTHLTDLTVSKFKKLISLLNRTGHARFRRAPVHPSSSSPVSAPPFASPAPVSVRHAPASFVPAQPQSMTLDFTKPNNNVLSSNAKSMELEFSKETTTFSVSSNSSFMSSAITGDGSVSNGKIFLTPAVAAPATSAGKPPLSSAPFTKKRCHDHREHSDDVSGSSKCHCIKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHALQAAMQENAAGVVGLVFEST 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi80g00026 314 SMART WRKY_cls 235 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi80g00026 314 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 300 IPR044810 GO:0003700
Sebi80g00026 314 FunFam WRKY transcription factor 65 219 296 - -
Sebi80g00026 314 Pfam Plant zinc cluster domain 189 233 IPR018872 -
Sebi80g00026 314 Gene3D WRKY domain 223 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi80g00026 314 SUPERFAMILY WRKY DNA-binding domain 233 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi80g00026 314 ProSiteProfiles WRKY domain profile. 230 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi80g00026 314 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi80g00026 314 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi80g00026 Sebi-Chr80 916257 917883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi80g00026 1 313 WRKY Transcription Factor Family AT2G24570 63.804 3.97e-122 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi80g00026 WRKY 8.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi80g00026 - - gmx:100791219 468.388