Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi808g00017 ATGGCTGACCAAGAGAACTGCATGCCCCGCCCTCAGCGCGCAGCCAAGAAGAGGGCCGCCGCTGCAATATGCGAAATGCGCAAGAAGAAGAGGGTCGCGTTGGGCGAGCTCACCAACTTGTCCACCGTCGTTTCCCCTCCGGAGAAACCCTCTTCGGAGGTTCACAAGGAGAAACGGAGAAAGGTCGGAAAACCAAAGCCGACGGCGGCGGCGGCGGAGAAGTTGGATGATGCTCAAACGTGTGGGCCATACGTTTCTGACATTTACGAGTATCTTCGCGGGATGGAGGTGGATCCTAGTAGAAGACCTTTACCTGATTATGTTCACAAAGTTCAGAAGGATGTTAATGCAAATATGAGGGGTGTTCTGGTGGATTGGTTGGTGGAGGTTGCCGAGGAATACAAGCTTGTTTCAGACACGCTTTATTTCTCTGTTTCTTACATAGATAGGTATCTGTCTTTGAATGCTCTATCTAGACAGAAGCTGCAATTACTGGGTGTTTCTTCAATGCTGATTGCTTCAAAATACGAGGAGATCAAGCCACCTGAGGTGGAGGACTTTTGTTACATTACGGACAACACATACTCCAAGGAAGAGGTTGTGGCCATGGAGGCTGATATATTGAAGTCCTTGAACTTCGAATTGGGCGGTCCTACTTCAATTTCTATTTTTCCTGGCATGTTGTCTCACTCTATGCCTGTGTTTGCAGAAGATTCTCTAGGGTGGCTCAAGAGAGTGTTGATGCTTCGGATTTGCAATTTGAGTTTCTTACCTACTACCTGGCCGAGCTCAAATTCAGCCCTCCATCTGCTCACCAGATATGAACCTGCTGAGTTGAAGGAGTGTGTTCTAAACATACATGATTTGTACCTCAGTAGGAGAGGGGGTTCTTTGCTGGCTGTGAGAGAGAAATACAAACAACATAAGTTCAAATGTGTAGCAACAACACCCTCTCCTCCCGAGATAACCGCTTTCTCTTTTGAATTTAGAGGGACGGATATTTAG 1005 0.4736 MADQENCMPRPQRAAKKRAAAAICEMRKKKRVALGELTNLSTVVSPPEKPSSEVHKEKRRKVGKPKPTAAAAEKLDDAQTCGPYVSDIYEYLRGMEVDPSRRPLPDYVHKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRYLSLNALSRQKLQLLGVSSMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVAMEADILKSLNFELGGPTSISIFPGMLSHSMPVFAEDSLGWLKRVLMLRICNLSFLPTTWPSSNSALHLLTRYEPAELKECVLNIHDLYLSRRGGSLLAVREKYKQHKFKCVATTPSPPEITAFSFEFRGTDI 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi808g00017 334 SUPERFAMILY Cyclin-like 194 322 IPR036915 -
Sebi808g00017 334 PANTHER CYCLINS 59 313 IPR039361 -
Sebi808g00017 334 ProSitePatterns Cyclins signature. 120 151 IPR006671 -
Sebi808g00017 334 Gene3D - 244 324 - -
Sebi808g00017 334 Gene3D - 103 216 - -
Sebi808g00017 334 Pfam Cyclin, N-terminal domain 87 215 IPR006671 -
Sebi808g00017 334 MobiDBLite consensus disorder prediction 50 71 - -
Sebi808g00017 334 MobiDBLite consensus disorder prediction 40 72 - -
Sebi808g00017 334 PIRSF Cyclin_A_B_D_E 252 326 IPR046965 GO:0016538|GO:0044772
Sebi808g00017 334 PIRSF Cyclin_A_B_D_E 2 241 IPR046965 GO:0016538|GO:0044772
Sebi808g00017 334 Gene3D - 87 222 - -
Sebi808g00017 334 SMART cyclin_7 125 209 IPR013763 -
Sebi808g00017 334 FunFam G2/mitotic-specific cyclin 103 216 - -
Sebi808g00017 334 SUPERFAMILY Cyclin-like 76 215 IPR036915 -
Sebi808g00017 334 Pfam Cyclin, C-terminal domain 261 318 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi808g00017 Sebi-Chr808 390209 392276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi808g00017 1 328 Core Cell Cycle Gene Families AT5G43080 53.541 7.25e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi808g00017 K06627 - gmx:100791691 401.364