Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi807g00004 ATGGAGGGCTCAAAGGAAAACCATCTGGTTCCGCTTCCTCCCATACTCTCTTCAAATGTTCAAGGCCGTTCAAGAAGGGAGGGTGTCAGTGTCAAACTCGGGAAGGGGATGAGACACCATCACCGGCTGCCTCTCAGCAAAGTCAATGACAATATTATGCCATGTACAGCGCAGACAGTTCAGCACTACTCTAAAGAAACAAAGAACCAGAACCTATTGGCCCCAACTCCAGCTTACCAGTTAGATTGTGCTATCATAGATACCGATGAATATGAGGATGACAGTGGTAATGCGGTTCCAGCATTTGTGAAACACACTGAAGCAATGCTAGACGAAATTGACAGAATAGAGGAAGTTGAAATGGGAGATGTGGAGGAACCTGTTATGGACATCGACGCCTGTGACAGGAATGATCCACTTGCAGTTGTTGAGTACATAGATGATATCTACCGTTTCTACAGGGAAACTGAGAAATCCAGCTGTGTCTCTCCAAATTACATGACTTGTCAGTTTGACATTAATGAGAAGATGAGGGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTATTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGGCAGTAATCAGAAAGAAGCTTCAGTTGGTTGGTGTAACAGCCATGCTTATAGCTTGTAAGTATGAGGAGGTAGCAGTCCCTACCGTTGAGGATTTTATTCTGATAACAGACAAGGCATACACACGAAATGAAGTTTTAATTATGGAGAAGTTAATGGTGAATATCTTGCAATTCAACTTGTCTGTGCCTACTCCATACGTATTCATGAGAAGATTTCTTAAGGCAGCTCATTCCGACAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGATCGAGCTATGCTTGGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAATGTAGTCTGTACCAGTTTAAGCAATGGACTAAGACCAGCGAGTGGTATACTGATTACTCGGAGGAGCAGCTTCTGTGA 1065 0.4338 MEGSKENHLVPLPPILSSNVQGRSRREGVSVKLGKGMRHHHRLPLSKVNDNIMPCTAQTVQHYSKETKNQNLLAPTPAYQLDCAIIDTDEYEDDSGNAVPAFVKHTEAMLDEIDRIEEVEMGDVEEPVMDIDACDRNDPLAVVEYIDDIYRFYRETEKSSCVSPNYMTCQFDINEKMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVAVPTVEDFILITDKAYTRNEVLIMEKLMVNILQFNLSVPTPYVFMRRFLKAAHSDKKLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTDYSEEQLL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi807g00004 354 SMART Cyclin_C_2 276 354 IPR004367 -
Sebi807g00004 354 SMART cyclin_7 183 267 IPR013763 -
Sebi807g00004 354 SMART cyclin_7 280 354 IPR013763 -
Sebi807g00004 354 Pfam Cyclin, C-terminal domain 276 353 IPR004367 -
Sebi807g00004 354 CDD CYCLIN_AtCycB-like_rpt1 125 271 - -
Sebi807g00004 354 MobiDBLite consensus disorder prediction 1 27 - -
Sebi807g00004 354 SUPERFAMILY Cyclin-like 137 273 IPR036915 -
Sebi807g00004 354 ProSitePatterns Cyclins signature. 178 209 IPR006671 -
Sebi807g00004 354 Gene3D - 148 353 - -
Sebi807g00004 354 SUPERFAMILY Cyclin-like 275 353 IPR036915 -
Sebi807g00004 354 PANTHER CYCLINS 101 332 IPR039361 -
Sebi807g00004 354 FunFam G2/mitotic-specific cyclin 162 274 - -
Sebi807g00004 354 Pfam Cyclin, N-terminal domain 148 274 IPR006671 -
Sebi807g00004 354 Gene3D - 162 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi807g00004 Sebi-Chr807 134862 137141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi807g00004 85 354 Core Cell Cycle Gene Families AT1G20610 67.636 3.62e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi807g00004 K21777 - gmx:100812029 533.102