Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi806g00014 ATGGGGCAATCACTGGGAATCTCAGACACCATGGTTTCTGCCAGTGGGAACATCGAACTGGGCTTTTTCAATAGAACCAGAGAGAATTCCACCAAGTACTACGTAGGTATATGGTTTAAAAATGTTCCAAACGACAAGATTATGTGGGTTGCTAACAGAGATTACGCATTTGAAACCTCCTCAGCCGTTCTCACCATTCAATCTGATGGAAACATTGTCATCATAGATGGACCACTGACTTACAGCGTGAGCAGTGTTCCAAACAACTCTAGCACCCACGCTTTGCTCTTGGATTCAGGAAATTTGATACTGTTGAACTACTCGAACGACTTGATTTTGTGGCAGAGTTTTGATAATCCCACGGATACACTTGTGCAGGGAATGCTCGTAGGACAGGAGTTCATTTTGAAATCATGGAAAAGTGCAGAGGACCCTGCTCCAGGAGCATTTTCACTCGTATATGATTTTCACAATGCGAGTCTAATAGTCCACAAGGGTTCTAATGTATTCTTCGTTGATAACAGCGCTTCTATTAATCGTGTTCTTCATCGACTAGATTCGGATCGGAATCGGAATCGGAACAAGGACTTTATCATTTGGCCAGGTGATAGCAATTCTCGAGTGGTATTAGAAGTGTCTGGGGATCTTAACTACCAGAAATGGTCAGAGAAAGCTAAGCGTTGGGTTTCTCTACAGTCATCCAAGTGCGGAACGAACAATTCGTGTGGAGATTTTTCCATTTGTAATCCGCAGCTAGAAGCTCTTGAACCTTGTCACTGTCTTGACGGTTTTGAACCGTTGGATGCTGATTCTTGGAGGCAGAGGAACAGATCCGGTGGATGTGTCAGGAGAAAGGAGTTGTCCTGCAGTAAAACAAATGTTGAATGGGACGATAGATTCTTACAGTTGTCTATGGTGGAGTTACCTTCAACTTCAAGTGAAGTTATGCTAAAGATGGATACAGCAGCGAGATGTGAACGCACTTGCTTTAACGATTGTTCTTGTGTTGCTTATGCTTATGATTTTAACAGTTACTGTTGGTTATGGCATGACCACTTATTTGGTCTGAAGAATGTCTCAGGTGATGTCGAAAATGTTAATAATACATGGTTTTATCTCAGACTTGCTGCCTCTGAGATTGCTATCATTGATTCAAACATAAGGAATGCACTTGGCAGGCATGAAAACAGGAAGAGGAGTCTACTTCTATTTGTCATACCAATCGCATTTCTAATATTGCATATACTGGGCCTATTTGTTTACTGGACTAAAAGGCAGAGGAAAGGGGAAGATTTGCTACATTTTGATGTACGCATGGGCATGAATGTTAAAGACACAGAGTTTACTGAAAGAGATAAGGGCTTAAAAGTTAAGAAAAAGGAAGTTAAATTACCATTATTCAGTTTTGGGAGCGTTTCAGCTGCAACTAATAACTTTTCAGATGCAAATAAACTTGCTTTGTCTAATCAACAAACAGGTAAATTATTGAATGGGGATGAGGTTGCTGTAAAAAGGCTATCCCGAAGATCTGGTCAAGGATGGGAGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAATAACCTTTCTCAGAAATCCCCTAAATATGCTCCCTTTTATTTAACTCAAACTCTGGTTGTGACCTCTCTTTCAATGTCAAGCAGATGCAACAAAAAGAAGGATGCTAGATTGGGAAACACGGATTTTGGAATGGCGAGAATATTTGGCGAGAATGAACTTCAAGCAAACACAAACCGGATAGTTGGAACTTATGGCTACATGTCCCCTGAATATGCTCTGGAAGGCCTTTTCTCAATAAAATCCGACGTGTTTAGCTTTGGGGTCCTTTTGTTAGAGATTGTGAGTGGCAAGAAGAATACCGGTTTTTATCAAACAAACTCCCTCAATCTCCTTGCTTAT 1929 0.4095 MGQSLGISDTMVSASGNIELGFFNRTRENSTKYYVGIWFKNVPNDKIMWVANRDYAFETSSAVLTIQSDGNIVIIDGPLTYSVSSVPNNSSTHALLLDSGNLILLNYSNDLILWQSFDNPTDTLVQGMLVGQEFILKSWKSAEDPAPGAFSLVYDFHNASLIVHKGSNVFFVDNSASINRVLHRLDSDRNRNRNKDFIIWPGDSNSRVVLEVSGDLNYQKWSEKAKRWVSLQSSKCGTNNSCGDFSICNPQLEALEPCHCLDGFEPLDADSWRQRNRSGGCVRRKELSCSKTNVEWDDRFLQLSMVELPSTSSEVMLKMDTAARCERTCFNDCSCVAYAYDFNSYCWLWHDHLFGLKNVSGDVENVNNTWFYLRLAASEIAIIDSNIRNALGRHENRKRSLLLFVIPIAFLILHILGLFVYWTKRQRKGEDLLHFDVRMGMNVKDTEFTERDKGLKVKKKEVKLPLFSFGSVSAATNNFSDANKLALSNQQTGKLLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLSQKSPKYAPFYLTQTLVVTSLSMSSRCNKKKDARLGNTDFGMARIFGENELQANTNRIVGTYGYMSPEYALEGLFSIKSDVFSFGVLLLEIVSGKKNTGFYQTNSLNLLAY 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi806g00014 643 CDD PAN_AP_plant 287 376 - -
Sebi806g00014 643 Gene3D - 1 117 IPR036426 -
Sebi806g00014 643 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 630 - -
Sebi806g00014 643 SMART ntp_6 295 369 IPR003609 -
Sebi806g00014 643 SUPERFAMILY Protein kinase-like (PK-like) 495 629 IPR011009 -
Sebi806g00014 643 ProSiteProfiles Protein kinase domain profile. 301 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi806g00014 643 Gene3D Transferase(Phosphotransferase) domain 1 552 643 - -
Sebi806g00014 643 ProSiteProfiles Bulb-type lectin domain profile. 1 117 IPR001480 -
Sebi806g00014 643 SUPERFAMILY alpha-D-mannose-specific plant lectins 33 122 IPR036426 -
Sebi806g00014 643 Pfam S-locus glycoprotein domain 187 266 IPR000858 GO:0048544
Sebi806g00014 643 Pfam D-mannose binding lectin 47 133 IPR001480 -
Sebi806g00014 643 Gene3D Phosphorylase Kinase; domain 1 453 534 - -
Sebi806g00014 643 CDD B_lectin 3 120 IPR001480 -
Sebi806g00014 643 Pfam Protein tyrosine and serine/threonine kinase 570 629 IPR001245 GO:0004672|GO:0006468
Sebi806g00014 643 SMART blect_4 2 120 IPR001480 -
Sebi806g00014 643 Pfam PAN-like domain 297 354 IPR003609 -
Sebi806g00014 643 ProSiteProfiles PAN/Apple domain profile. 289 376 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi806g00014 Sebi-Chr806 315155 317844 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi806g00014 467 643 Receptor kinase-like Gene Family AT3G45860 42.424 1.32e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi806g00014 PK_Tyr_Ser-Thr 6.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi806g00014 - - psat:127086248 704.131