Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi806g00012 ATGTCAAAAACTTCCACTTCACTAGACACTTTATCAGTGAATGAATCTATCCAAGATGGGGAGACTTTAGTTTCAGCAGGTGGAATTACTGAAGTGGGTTTCTTTAGCCCAGGAAATACAACACGTCGATACTTGGCTGTATGGTTCAGGAATGTATCCCCAACAACAGTGATATGGGTGGCCAACCGAGAAACACCTCTCCACAATAACTCAGGATTTTTAAAACTCAATGAAGAAGGGATTCTTCAACTTCTCAATGGCACAAACAGCATTATTTGGTCATCCAATATATCAAGCAAGGCAGGGAGTAATCCAATTGCTCAGATCTTGGATTCAGGAAACTTTGTAGTGAAAAATGGACAGGAAACTAACAAGGACAACTTTTTTTGGCAGAGTTTTGATTATCCTTGCGATACATTGTTGCCAGGAATGAAGCTTGGATGGAACTTGCAAACTGGTCAAGAAAGATTTCTGTCATCTTGGAAAAGTGCTGATGATCCTGCCAAGGGAGAATATACTTTGAGAATTGACCTTAGAGGATATCCCCAATTAATTAAATTCAGGGAAACTGATATACATGTTAGAGCAGGGTCATGGAATGGCCAGTCTATGACTGAATATCCACTTCCAACTCCTGGAGTTTTACAAACATTTGTGTTCAATGAAAAAGAAGTGTATTATGAGTTCGAGATTCTTTACAAATCGACCTTCAGCACATATACACTTACCGTACCAGGTGCCGGGCAGAGTTATTTCTGGACAACTGAACAAGACATCAGGGAAGCCACCTCAATTGTGGAGGAGGATCAGTGCGAAAATTATGCCACTTGTGGTTCAAATTCTGTATGCAATATTGATGGGAACCATCTAACTTGTGAATGCCTGAAAGGATATGTCCCCAAGTTTATTGAACAATGGAATGTATCAGTTTGGTCTAACGGTTGTGTTCCAAGGAATAAATCTACTTGTGGAAACAGGTACGCAGATGGCTTCTTGAAGTACAGAGGAATGAAATTGCCAGACACGTCTTCGTCATGGTTTAATAAGACCATGAACCTTGAGGAATGTCAGAAATCATGTCTGAAAAACTGTTCATGTGTAGCATATGCAAATTTAGATATCCGTAATGGAGGAAGTGGTTGTCTACTCTGGTTTAACAATCTGGTTGACGTGAGGAAATTCTCTCAATGGGGACAAGATCTTTATGTCAGAGTCCCTGCTTCAGAACTAGATTCAAACATGACAATTACATTTGGTAAGCATGAAAATAGGAAGAGTAGTATACTTCCAACTGTCATACCGATCTCATTATTTCTAATACTGCTTATACCTGGTCTATTCGTTTACTGGACTAGAAGGCAGAGGAAAGGGGAAGATTTGCTACATTTTGATGTAGGCATGAGCATGAAAGTTAAAGACACAGAGTTTACTGAAATAGATAAGGGTTCGAAAGTTAAGAAGAAGGAAGTCAAATTGCCATTATTCAGTTTTGGGAGCGTTTCAGCTGCAACTAATAACTTTTCAGATGCAAATAAACTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGGGGATGAGGTTGCTGTAAAAAGACTATCCCGGAGATCTGGTCAAGGATGGGAGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACATAATAATCTTGTTAGACTTTTAGATGCAACAAAAAGAAGGATGCTAGATTGGGGAACACGAGTTCGAATAATTGATGGCATTGCCCAAGGACTCCTTTATCTTCATCAGTATTCAAGGTTCCGGATCATTCATAGAGATTTAAAAGCTAGCAACATATTGTTAGACATCAACATGAATCCTAAAATATCAGATTTTGGAATGGCGAGAATGTTTGGTGAAAATGAACTTCAAGCAAATACAAACCGGATAGTTGGAACTCAAGATTTTGAGTGGCAAGAAGAATACCGTTTTTATCAAACAAACTCCCTCAATCTCCTTGCTTATGCTTGGGATCTATGGACAAGTAATTCGGCAATGGACCTTATAGATCCAACATTGGAAGATATCTCCAATAAGCATGTAGTGCCAAGATATGTGAACATAGGACTTCTTTGTGTCCAAGATAGTCCAACAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGCAATGACACTGCGGCCCTTCCTCGTCCAATGCCACCTGCATTTCTAAATGTGAGAGGTAATGATAATTCAAGATTGGCCAGAAGTGAAGAAGAAAACCTTTCTGTGAATATTATCACAGATTCACTTGTGGAACCAAGATGA 2313 0.3934 MSKTSTSLDTLSVNESIQDGETLVSAGGITEVGFFSPGNTTRRYLAVWFRNVSPTTVIWVANRETPLHNNSGFLKLNEEGILQLLNGTNSIIWSSNISSKAGSNPIAQILDSGNFVVKNGQETNKDNFFWQSFDYPCDTLLPGMKLGWNLQTGQERFLSSWKSADDPAKGEYTLRIDLRGYPQLIKFRETDIHVRAGSWNGQSMTEYPLPTPGVLQTFVFNEKEVYYEFEILYKSTFSTYTLTVPGAGQSYFWTTEQDIREATSIVEEDQCENYATCGSNSVCNIDGNHLTCECLKGYVPKFIEQWNVSVWSNGCVPRNKSTCGNRYADGFLKYRGMKLPDTSSSWFNKTMNLEECQKSCLKNCSCVAYANLDIRNGGSGCLLWFNNLVDVRKFSQWGQDLYVRVPASELDSNMTITFGKHENRKSSILPTVIPISLFLILLIPGLFVYWTRRQRKGEDLLHFDVGMSMKVKDTEFTEIDKGSKVKKKEVKLPLFSFGSVSAATNNFSDANKLGEGGFGPVYKGKLLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLDATKRRMLDWGTRVRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMNPKISDFGMARMFGENELQANTNRIVGTQDFEWQEEYRFYQTNSLNLLAYAWDLWTSNSAMDLIDPTLEDISNKHVVPRYVNIGLLCVQDSPTDRPTMSDVVSMIGNDTAALPRPMPPAFLNVRGNDNSRLARSEEENLSVNIITDSLVEPR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi806g00012 770 Gene3D Phosphorylase Kinase; domain 1 466 571 - -
Sebi806g00012 770 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 714 - -
Sebi806g00012 770 SMART serkin_6 507 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi806g00012 770 Gene3D - 2 133 IPR036426 -
Sebi806g00012 770 ProSiteProfiles PAN/Apple domain profile. 323 406 IPR003609 -
Sebi806g00012 770 ProSiteProfiles Protein kinase domain profile. 507 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi806g00012 770 CDD PAN_AP_plant 320 406 - -
Sebi806g00012 770 Pfam Protein kinase domain 508 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi806g00012 770 Pfam Protein kinase domain 582 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi806g00012 770 PIRSF SRK 652 770 IPR024171 GO:0004674
Sebi806g00012 770 PIRSF SRK 1 568 IPR024171 GO:0004674
Sebi806g00012 770 PIRSF SRK 566 649 IPR024171 GO:0004674
Sebi806g00012 770 Gene3D Hepatocyte Growth Factor 322 402 - -
Sebi806g00012 770 FunFam Uncharacterized protein 483 575 - -
Sebi806g00012 770 SUPERFAMILY Protein kinase-like (PK-like) 491 746 IPR011009 -
Sebi806g00012 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Sebi806g00012 770 Pfam D-mannose binding lectin 56 162 IPR001480 -
Sebi806g00012 770 FunFam Os07g0541700 protein 558 646 - -
Sebi806g00012 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 133 - -
Sebi806g00012 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 322 405 - -
Sebi806g00012 770 CDD B_lectin 14 136 IPR001480 -
Sebi806g00012 770 ProSiteProfiles Bulb-type lectin domain profile. 8 130 IPR001480 -
Sebi806g00012 770 SMART ntp_6 326 405 IPR003609 -
Sebi806g00012 770 SMART blect_4 14 136 IPR001480 -
Sebi806g00012 770 Gene3D Transferase(Phosphotransferase) domain 1 572 652 - -
Sebi806g00012 770 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 167 IPR036426 -
Sebi806g00012 770 Pfam S-locus glycoprotein domain 195 302 IPR000858 GO:0048544
Sebi806g00012 770 Gene3D Transferase(Phosphotransferase) domain 1 653 731 - -
Sebi806g00012 770 Pfam PAN-like domain 326 391 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi806g00012 Sebi-Chr806 295822 302297 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi806g00012 486 739 Receptor kinase-like Gene Family AT4G23250 45.541 5.52e-78 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi806g00012 S_locus_glycop 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi806g00012 - - gmx:100815430 838.18