Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi805g00013 ATGATTCAACAGGAAATCAGAAAAGGTCCCTGGACAGAACAGGAGGACTTCAAATTGGTGTATTTTGTTGGGCTATTTGGAGATCGTAGATGGGACTTTATAGCTAAGGTTTCAGGTTTGAGTAGAACAGGTAAAAGTTGCAGGTTACGTTGGGTTAATTACCTGCATCCTGATCTCAAACGAGGGAAGATGACACCTCAAGAAGAGCGCCTTGTCATCGAGCTTCACTCCAAATGGGGAAATAGCTGTCAATCCTCACAATCATCAAATAATCAAGCTGTTGATTCCAAAGAATCTAGCGAAGAAAGCTCTTATGACACAGGTGGACCTGATAACAAGATGACAAGCTCAACAGGAATTCATATTGTTGGGGAAGATGGAGAACAGGGGTACTCTATGGATGATATATGGAAAGATATTGCTATGTCAATAGATAATAACAACATGATCAATCTGCAACCACCAGTCAGTGAAGAAGGTTGCAACTTCTCTTGTCCTCCTCTTCTTCCATCATGGGATTATTATAATTATTCTTCAGATCAACTATGGGTGATGGATGAATTAGAAGAAAGCAAGATGTTATTCCCTGTAGGTGATCAATATTTTTCATGCTATGGTGAAGGAAGCGCATTTTTAACCGGTTAA 645 0.3984 MIQQEIRKGPWTEQEDFKLVYFVGLFGDRRWDFIAKVSGLSRTGKSCRLRWVNYLHPDLKRGKMTPQEERLVIELHSKWGNSCQSSQSSNNQAVDSKESSEESSYDTGGPDNKMTSSTGIHIVGEDGEQGYSMDDIWKDIAMSIDNNNMINLQPPVSEEGCNFSCPPLLPSWDYYNYSSDQLWVMDELEESKMLFPVGDQYFSCYGEGSAFLTG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi805g00013 214 MobiDBLite consensus disorder prediction 81 118 - -
Sebi805g00013 214 SMART sant 7 57 IPR001005 -
Sebi805g00013 214 SMART sant 60 151 IPR001005 -
Sebi805g00013 214 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Sebi805g00013 214 CDD SANT 10 55 IPR001005 -
Sebi805g00013 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 59 IPR017930 -
Sebi805g00013 214 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Sebi805g00013 214 Gene3D - 8 60 - -
Sebi805g00013 214 FunFam Myb transcription factor 8 60 - -
Sebi805g00013 214 MobiDBLite consensus disorder prediction 81 98 - -
Sebi805g00013 214 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 82 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi805g00013 214 SUPERFAMILY Homeodomain-like 9 82 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi805g00013 Sebi-Chr805 224730 225816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi805g00013 1 212 MYB Transcription Factor Family AT5G59780 44.800 5.48e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi805g00013 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi805g00013 K09422 - gmx:100776886 247.284