Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi804g00003 ATGACCATGGAAGATTTTTATGATATTAAGACATCAATCATTGACGGTCATTCGGTATGCTTGTTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAATATTTGAAGGAGCATCTATTTAAAAATCTCATGAAGCATCCAAAGTTTTTGACAGATACCAAATTGGCTATAAGGGCCTGGGGTTGGGTTCCTGCATGGAAATTGCCAATTGAATGCTTTTCATTTTCCGTCATTAGTATGTGCAATTATAATAACTTTGGTGATCTTGCAGGTGAAACATATCAGCAAACTGATGCTGACTTTCTGAATTCTGAAAAAGATACTTTCCGGGATGATGGTTCAACTGCTTCAACAGCAGTTTTGGTTGATAAGCATCTTTATGTTGCAAATGTTGGAGATTCTAGAACTGTAATATCAAAAGCTGGAAAAGCAATTGCGCTATCTGAGGATCATAAGCCTAACAGAAGTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTTGGAGGGGTGCTAGCAATGTCTCGTGCCTTTGGCAATCGTATGTTGAAGCCATTTGTGGTAGCAGAACCTGAGATCCAGGACCAGGAGATAAATGAAGAAACTGATCTGCTTGTTCTTGCAAGTGATGGACTCTGGGATGTAGTACCAAATGAGGATGCTGTTTCTCTTGCCCGCGCAGAGGAGGAGGCTGAGGCAGCTGCTCGTAAGTTAACAGAAGCTGCTTTTGCTCGTGGTAGTGCAGATAACATTACTTGCATTGTGGTGCGCTTCAATCATGAAAAAGCAGCATTCCCAGCTAATCCTGACAAGGCAGGTCCAGCTAGCAGTCAGCATGAATAG 876 0.4281 MTMEDFYDIKTSIIDGHSVCLFGIFDGHGGSRAAEYLKEHLFKNLMKHPKFLTDTKLAIRAWGWVPAWKLPIECFSFSVISMCNYNNFGDLAGETYQQTDADFLNSEKDTFRDDGSTASTAVLVDKHLYVANVGDSRTVISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDQEINEETDLLVLASDGLWDVVPNEDAVSLARAEEEAEAAARKLTEAAFARGSADNITCIVVRFNHEKAAFPANPDKAGPASSQHE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi804g00003 291 ProSiteProfiles PPM-type phosphatase domain profile. 1 269 IPR001932 -
Sebi804g00003 291 SUPERFAMILY PP2C-like 2 271 IPR036457 -
Sebi804g00003 291 CDD PP2Cc 2 269 IPR001932 -
Sebi804g00003 291 SMART PP2C_4 1 267 IPR001932 -
Sebi804g00003 291 Pfam Protein phosphatase 2C 18 262 IPR001932 -
Sebi804g00003 291 Gene3D - 1 275 IPR036457 -
Sebi804g00003 291 PANTHER PROTEIN PHOSPHATASE 3 269 IPR015655 GO:0004722|GO:0006470
Sebi804g00003 291 Coils Coil 235 255 - -
Sebi804g00003 291 ProSitePatterns PPM-type phosphatase domain signature. 21 29 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi804g00003 Sebi-Chr804 66618 72342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi804g00003 2 277 PP2C-type Phosphatase Gene Family AT5G53140 72.826 1.44e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi804g00003 K17506 - gmx:100805795 416.387