Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi803g00027 ATGGAGGAAAGAGAGAATTTTGGTGTTGGGCATGCAGTGGTAGGTGATGAAGCTCCAGCGAGCTTCCACGTGGCTCCCAGAATTGAGAACAACTTGGATTTTTCGAGGGGTACTATGCCGGTTCCGGTGCCGGCGACGGAGGGGAAGAAGAAGAGGGGGAGGCCTAGGAAGTATGGACCTGACGGCAGGGTGATGTCAGGGACAGTGACGGCGCTTTCTCCAATGCCGATTTCATCGTCTATTCCGTTGACCGGCGAATTCTCCGCTTGGAAACGAGGTGAAGGAATTGCATACTCAGTTGGTGCCAATTTCACACCGCATGTGCTTACAGTAAATGCTGGCGAGGATGTTACCATGAAGATTATGTCCTTCTCTCAACAAGGATCACGTGCTATATGCATTCTCTCTGCGACTGGCACAATTTCAAATGTTACACTTCGTCAACCAAGTTCTTCCGGGGGTACTTTAACATATGAGGGACGGTTTGAGATTCTTTCCTTGTCTGGTTCTTTTATGCCAACTGAGAATGGAGTTACAAGAAGCAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGTCCAGATGGTCGAGTAATGGGTGGTGGACTTGCTGGTTTGCTGGTAGCCGCTGGTCCTGTGCAGGTTGTTGTGGCCAGTTTTCTTCCTGGTCACCAGCTGGAGCATAAAAGCAAGAAGCAGAGGGTGGATCATATATCAACTATTACCTCTTCACCTGTTAATCTTATCTCTAGTGAGGAAATAAAAGTCAGTTTTGGTGGAGTAAAGCCTATTATGACACCTGCTGCTTTTCAAGAAGAGAATATTGCTTCTTTTAACAATGTTCAAGACTCTAGGAACTCATCTGCTGATGATAAAGATCCTTTACCTGAAAAGGAATCTAACCTAAGTCAATCAAATGCTGAGGCAGCATGCTAA 933 0.4673 MEERENFGVGHAVVGDEAPASFHVAPRIENNLDFSRGTMPVPVPATEGKKKRGRPRKYGPDGRVMSGTVTALSPMPISSSIPLTGEFSAWKRGEGIAYSVGANFTPHVLTVNAGEDVTMKIMSFSQQGSRAICILSATGTISNVTLRQPSSSGGTLTYEGRFEILSLSGSFMPTENGVTRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEHKSKKQRVDHISTITSSPVNLISSEEIKVSFGGVKPIMTPAAFQEENIASFNNVQDSRNSSADDKDPLPEKESNLSQSNAEAAC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi803g00027 310 Gene3D - 106 239 - -
Sebi803g00027 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 222 - -
Sebi803g00027 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 219 IPR005175 -
Sebi803g00027 310 CDD DUF296 105 219 IPR005175 -
Sebi803g00027 310 FunFam AT-hook motif nuclear-localized protein 1-like 106 237 - -
Sebi803g00027 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 288 IPR039605 GO:0003680
Sebi803g00027 310 MobiDBLite consensus disorder prediction 33 62 - -
Sebi803g00027 310 ProSiteProfiles PPC domain profile profile. 101 243 IPR005175 -
Sebi803g00027 310 MobiDBLite consensus disorder prediction 279 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi803g00027 Sebi-Chr803 340713 346111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi803g00027 38 267 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 57.955 1.51e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi803g00027 - - gmx:100789179 519.235