Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi803g00022 ATGGACTTGAAAGCCAGTTTGGACCCAGAGAGCCATTATCTACCCTCCTGGACTATCAATGGCAACCCATGTGATGGATCTTTTGAAGGAGTAGCATGCAATGAGAAGGGTCAAGTGGCTAACATTTCTTTGCAGGGAAAGGGCCTCCCAGGGAAGCTTTCACCAGCCATTGCTGGCCTCAAGCATTTGACAGGACTCTACTTGCATTATAACTCTTTCAGCATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATCAGTTGACAGGAAGCATACCTACACAGCTTGGTTCTTTGAAAAAGCTAACTGTTGTGGCTTTGCAGTCAAACCAGTTATCTGGTGCTATCCCTGCTAATCTAGGTGATTTGGGTATGCTGGTGAGGCTAGATTTGGGCTCTAACAATCTCTTTGGTTCCATTCCCACTAGCCTAGCTGATGCTCCATCACTGAAAGTTTTGGATGTTCACAACAATACACTTTCTGGGAATGTACCTCTTGCTCTTAAGAGACTAGATGATGGGTTTTCTTATGAAGACAATTTGGGGTTATGTGGAGTTGGGTTTCCAACCTTGAAAACTTGCAATGATTCAGATCATGCCAATCCAAGCAGACCTGAACCTACAAGAGATATCCCAGAAACTGCAAATGTGAAGTTACCTTGCAATGGAACTCGGTGCCTTAATTCATCAAAATCTAATCCAGCCACATCAATTATTGTTGGCATATTTGTGGCTATAATTGCAATGTCAGCAATTGGTATTTTGACCTTCACACTATACCGTCGGCGAAAACAAAAGCTTGGAAATTCTTTTCATATCTCTGATAGCCGTCCAAGTACTGATGAAGCCAAGGGTATATACAGGAAAAATGGATCTCCTTTGGTCAGTCTTGAGTACTCTACTGGATGGGACCCTTTAGCTGATAGTAGGAGTTTCAATGGGGATAGCCAGGATAGGTTCCAGAGTTTTAGGTTCAACTTGGAAGAAGTTGAATCAGCTACTCAATATTTCTCAGAACTGAATTTGTTGGGAAAGAGTAACTTCAGTGCAACATATAAAGGAGTTCTAAGAGATGGATCTGTTGTTGCTGTGAAGAGTATTAGTAAAACAAGTTGCAAGTCTGATGAAGCTGAGTTTTTGAAGGGACTGAATATGTTGACTTCACTGAGGAATGATAATTTAGAAGGTGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATAGCATATTTACATGCATACAAAGCAAACAAACCGGTTCTTGTTCACCAAAACATTTCAGCTGACAAAGTTCTCATTGATCGGCGCTACAATCCATTGCTAGCAGATTCTGGCTTGTACAAGCTTCTCACTAATGATATTGTCTTCTCTGCACTTAAGGCTAGTGCAGCAAAGGGTTACTTGGCTCCTGAATACACCACTACTGGCCGGTTTACAGAGACAAGTGATGTTTATGCTTTTGGGGTGCTGCTTTTCCAGATCCTTTCAGGGAAACAGAAGATAACTAGTTCAATAAGGCTTTCTGCAGAATCATTCAGATTCAAGGAATTTATTGACCCAAATCTCTATGGCAGGTTCTTTGAATATGAGGCAGCTAAGCTGGTAAAAATAGCTTTGCTTTGCACCCATGAGTCTCCTTTTGAGAGGCCATCCATGGAAGTCATTGTTCAAGAACTGGGAAATTGTAGTAGCTGTCTCTGA 1728 0.4149 MDLKASLDPESHYLPSWTINGNPCDGSFEGVACNEKGQVANISLQGKGLPGKLSPAIAGLKHLTGLYLHYNSFSMENLQVLQLCYNQLTGSIPTQLGSLKKLTVVALQSNQLSGAIPANLGDLGMLVRLDLGSNNLFGSIPTSLADAPSLKVLDVHNNTLSGNVPLALKRLDDGFSYEDNLGLCGVGFPTLKTCNDSDHANPSRPEPTRDIPETANVKLPCNGTRCLNSSKSNPATSIIVGIFVAIIAMSAIGILTFTLYRRRKQKLGNSFHISDSRPSTDEAKGIYRKNGSPLVSLEYSTGWDPLADSRSFNGDSQDRFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNMLTSLRNDNLEGDGEVLEWSTRVSIVKGIAKGIAYLHAYKANKPVLVHQNISADKVLIDRRYNPLLADSGLYKLLTNDIVFSALKASAAKGYLAPEYTTTGRFTETSDVYAFGVLLFQILSGKQKITSSIRLSAESFRFKEFIDPNLYGRFFEYEAAKLVKIALLCTHESPFERPSMEVIVQELGNCSSCL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi803g00022 575 ProSiteProfiles Protein kinase domain profile. 246 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi803g00022 575 Gene3D Phosphorylase Kinase; domain 1 307 391 - -
Sebi803g00022 575 SUPERFAMILY L domain-like 7 171 - -
Sebi803g00022 575 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 230 394 - -
Sebi803g00022 575 SUPERFAMILY Protein kinase-like (PK-like) 315 568 IPR011009 -
Sebi803g00022 575 Gene3D Ribonuclease Inhibitor 1 74 IPR032675 -
Sebi803g00022 575 Gene3D Ribonuclease Inhibitor 75 196 IPR032675 -
Sebi803g00022 575 FunFam Protein NSP-INTERACTING KINASE 2 308 396 - -
Sebi803g00022 575 Pfam Leucine rich repeat N-terminal domain 2 34 IPR013210 -
Sebi803g00022 575 Gene3D Transferase(Phosphotransferase) domain 1 392 574 - -
Sebi803g00022 575 MobiDBLite consensus disorder prediction 196 215 - -
Sebi803g00022 575 Pfam Protein tyrosine and serine/threonine kinase 398 568 IPR001245 GO:0004672|GO:0006468
Sebi803g00022 575 FunFam Protein NSP-INTERACTING KINASE 2 73 195 - -
Sebi803g00022 575 FunFam Protein NSP-INTERACTING KINASE 2 384 572 - -
Sebi803g00022 575 CDD TM_EGFR-like 232 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi803g00022 Sebi-Chr803 266923 269842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi803g00022 1 416 Miscellaneous Gene Families AT4G22730 46.507 2.44e-139 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Sebi803g00022 PK_Tyr_Ser-Thr 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi803g00022 - - gmx:100816801 956.051