Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi803g00016 ATGGTGTTCAATAAGGATGAGGCCATCAGAGCTAGAGAAATCGCTGAGAACAAGTTTGCTGCAAAGGATATTTTGGGAGCAATGGAGTTTGCTTTGAGGGCCCAGAGGTTATTTCCTTATCTTGAGGGCATTTCTCAAATGATAACAACATTTCATGTGTATATTTGTGCTACCAATGAAATAAATGGTGAAGTTGATTGGTATGGTATACTTGGTGTGGATCCCCTTGCTGATGATGACACAATGAGGAAACAATATAGAAAGATGACTCATGTGCTTCACCCTGATAATAACAAGTCCGTTGGTGCAGATGGGGCCTTTAAACTGATTTCAGATGCATGGAGTTTACTATCAGATGAGGCTAAAAGGGTAGCATATGATGAGAAGATAAATGCAAAATCAGCTCAAACAGGGGCTGATGGAAGTTACAGTTTTACTGAGACTACTGCTTCAAATGCAAGGACTCAGGGGAAAACTGCTGATGGCATGAAAGTTGTGAAGGACGAAGAAATGGTTAACAATGAGGATACTATGATTAAAGAAACAACAGATAACATGAAAGAAGCTGATGGTGAGGAAATGAACAAAGATATGGGAGCATCTGGCGAAGAGAAGAAGGAAATTGAAACTATGGAAGAGGGGAAAAAATGGTAG 654 0.3991 MVFNKDEAIRAREIAENKFAAKDILGAMEFALRAQRLFPYLEGISQMITTFHVYICATNEINGEVDWYGILGVDPLADDDTMRKQYRKMTHVLHPDNNKSVGADGAFKLISDAWSLLSDEAKRVAYDEKINAKSAQTGADGSYSFTETTASNARTQGKTADGMKVVKDEEMVNNEDTMIKETTDNMKEADGEEMNKDMGASGEEKKEIETMEEGKKW 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi803g00016 217 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Sebi803g00016 217 Pfam DnaJ domain 66 127 IPR001623 -
Sebi803g00016 217 MobiDBLite consensus disorder prediction 138 158 - -
Sebi803g00016 217 SUPERFAMILY Chaperone J-domain 53 129 IPR036869 -
Sebi803g00016 217 Gene3D DnaJ domain 63 213 IPR036869 -
Sebi803g00016 217 PRINTS DnaJ domain signature 86 101 IPR001623 -
Sebi803g00016 217 PRINTS DnaJ domain signature 102 122 IPR001623 -
Sebi803g00016 217 PRINTS DnaJ domain signature 122 141 IPR001623 -
Sebi803g00016 217 PRINTS DnaJ domain signature 68 86 IPR001623 -
Sebi803g00016 217 MobiDBLite consensus disorder prediction 177 217 - -
Sebi803g00016 217 MobiDBLite consensus disorder prediction 138 159 - -
Sebi803g00016 217 PANTHER BNAC03G44070D PROTEIN 1 144 - -
Sebi803g00016 217 CDD DnaJ 66 119 IPR001623 -
Sebi803g00016 217 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Sebi803g00016 217 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi803g00016 Sebi-Chr803 191418 192071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi803g00016 4 131 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.313 1.59e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi803g00016 - - ahf:112751648 217.624