Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi803g00013 ATGGCTTCAATTGAGAATAGCCAAGAAGCAATTGAACTTTCTCAAGGCCAAGCTTTGTTGTACATGAACATGTTTGGTTTCCTAAAATCCATGTGTCTTAAATGGGCTGTCCAACAAGGCATTGCAGACATAATACACAACCATGCCAAACCCATCACTCTTCCTGAATTGGTCTCAACTCTTCAAGTTCCACCATCCAGGGCTAGTTTTGTGCAGCGACTCATGCGCTTTCTAGCACACAATGGAATCTTTGCAATAATCCATGAGAGCAAAGAGGATCATGAAGCATATGCTCTGACTCCAGCATCAAAGCTTCTTTCAAAGGCATGTAGTGACCATTGTTTGTCTCCAATGGTTAAGATGTCTACTGATCCAGTTCTCATGAATAAGTTCCACCAATTGGGGGACTGGATTTGTGGGGAAATCCCCACTTTATATGAGGCAGCCTTAGGAAAACCCGTGTGGGAATTTCTTGAGGAAAACCCTGCTTATATGAGTCTCTTCAATGAGGCAATGGCAGGGGATTCTCAAATGGTAGACTTGGCATTGAAAAATTGCATTTCAGTCTTTGAGGGGCTAGATTCCATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCTAAAATTATCTCTGAGGCATTCCCTAAGTTGAATTGTGTTGTATTTGACCTTCCACAGGTTGTGGCTAACTTGTCAGGTAACAATAATTTGAGTTATGTTGGTGGGGACATGTTCCAATTTATCCCTCAAGCCGATGCAATTCTAGTAAAGATTCTGAAAAACTGTAAAGATTCCGTTTCAAGGAATGGCAAGAGAGGGAAAGTGATTATCATGGATATAATAATAAATGAAAAAGAAGATGACCAAGATATGACTCAAACAAAACTTTGTATGGATATAATCATGATGGGTATTAATGGAAAAGAGAGAACTGAAAAAGAATGGAAGCAGCTCTTCATTGAGGCAGGGTTCAAAGACTATAAAATATTTCCCTTATTTGGCTTTAGATCTCTTATTGAACTCTATCCTACATTGTTATGA 1041 0.3977 MASIENSQEAIELSQGQALLYMNMFGFLKSMCLKWAVQQGIADIIHNHAKPITLPELVSTLQVPPSRASFVQRLMRFLAHNGIFAIIHESKEDHEAYALTPASKLLSKACSDHCLSPMVKMSTDPVLMNKFHQLGDWICGEIPTLYEAALGKPVWEFLEENPAYMSLFNEAMAGDSQMVDLALKNCISVFEGLDSIVDVGGGTGTTAKIISEAFPKLNCVVFDLPQVVANLSGNNNLSYVGGDMFQFIPQADAILVKILKNCKDSVSRNGKRGKVIIMDIIINEKEDDQDMTQTKLCMDIIMMGINGKERTEKEWKQLFIEAGFKDYKIFPLFGFRSLIELYPTLL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi803g00013 346 Gene3D - 1 106 IPR036388 -
Sebi803g00013 346 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 343 IPR016461 GO:0008168
Sebi803g00013 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 341 IPR029063 -
Sebi803g00013 346 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
Sebi803g00013 346 Pfam O-methyltransferase domain 131 325 IPR001077 GO:0008171
Sebi803g00013 346 PIRSF O-mtase 1 344 IPR016461 GO:0008168
Sebi803g00013 346 Gene3D Vaccinia Virus protein VP39 109 343 IPR029063 -
Sebi803g00013 346 FunFam O-methyltransferase ZRP4 109 343 - -
Sebi803g00013 346 SUPERFAMILY "Winged helix" DNA-binding domain 12 108 IPR036390 -
Sebi803g00013 346 PANTHER O-METHYLTRANSFERASE 20 328 IPR016461 GO:0008168
Sebi803g00013 346 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi803g00013 Sebi-Chr803 166077 167468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi803g00013 31 345 Monolignol Biosynthesis Gene Families AT5G54160 32.440 3.28e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi803g00013 K22588 K13262 gmx:100818947 482.641