Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi803g00006 ATGGCCACCAGGCGTTTGAGGGCATTCAAACGGTGGATGAAGTCTCATGGATTCGAATGGAGCGATGCACTGGAGTTTGTGGACACCCCAGAAGAGGGAATAGCTGTGAGAGCTCTGTGTCAATTGAAGGAAGGTGATGTTGTGGCCAAGATGCCAAAGGAAGCTTGTCTTACTACCAAGACTAGTGGGGCACGTGATATCATTGAAGATGCTGGTTTGGGTGGTCAATTGGGGCTAGCATTTGCCATCATGTATGAGAGAAGCTTGGGTGGGGACTCCCCATGGGCTGGCTACCTTCAGCTATTGCCTCACCAAGAGTGCTTGCCTATTGTTTGGACCCTCAATGAAGTAAACGACCTTTTGTGTGGTACTGAACTTCACCAGGAAGTGCTAGATTGTCAAGGGCAAGAAAAGGATATTGAAGTGGAAAACTGTAAACTTGCAAGCAGTTATCTTGGTGCCGAAGATGTGCATTTCACTGCTATGCCCTCTAATTATGAATCTGACAATGATGCCGATAGTTCTGAAGAGGGCATTGTTGATGACGAAGCATTGGCTCAAAATTCCTCCATAGTTATGACAGAGTCTAATACTGCCAGTGTTGAGAACTGCATTGTTAGTGACTTGGAGAGTTCTTCGGTTACTGAGGGAGATACTTCAATGCTAGAGATGATTGTGATAAAAGATGTCAGCAGTGGAGCTGAGGTATTTAATACTTACGGGTTATTGGGTAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGACAATTCCTATGATATTGTTAACATTGATTTGGAACTGGTACTTCAATGGTGTTCTTCTTTGTTTTCTGACCGCCACAGTAGAGCAAGAATCTCCCTTTGGAGAAGACTAGGCTATTCTGCATGTGGCTACCAAAACTCAGAATATTTTGAGATCTCATTTGATGGAGAACCACAGATTGAACTCCTCATTTTATTATACATCATGTTATTACCAGATAATGCCTACCATAAGTTAGACCTATCAGTATCAATTGCTGGAAATTGTCATGAATCAAGTGAAACTACTCTTTTGAATGATAATATATTTCTAAAGAAAGCATCTGATATGAGCAAGAAATCCTTGATGACTAAAGAAGTTTGTGATGCTCTGTTGTCACTCGCTGATATGAGGGAGAGTCTCTATGGTTTGAAATCAATAGAAGATGATATTGAGGCATTGGGAAGGTGTAGTTTAGTTGGAGAGAAAAAGCTGTATCATTCTTTGGTGCTGCGCATCAGTGAAAGGAAGATCCTTCAAAAACTCAGAAATTATGCTTCTCAGTCATATAAATTCACTGATCATAGTTCTGCGAGGAAGAAGTTGAAAAGGACAACAAAGAAAGATAGTTGA 1383 0.4121 MATRRLRAFKRWMKSHGFEWSDALEFVDTPEEGIAVRALCQLKEGDVVAKMPKEACLTTKTSGARDIIEDAGLGGQLGLAFAIMYERSLGGDSPWAGYLQLLPHQECLPIVWTLNEVNDLLCGTELHQEVLDCQGQEKDIEVENCKLASSYLGAEDVHFTAMPSNYESDNDADSSEEGIVDDEALAQNSSIVMTESNTASVENCIVSDLESSSVTEGDTSMLEMIVIKDVSSGAEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDLELVLQWCSSLFSDRHSRARISLWRRLGYSACGYQNSEYFEISFDGEPQIELLILLYIMLLPDNAYHKLDLSVSIAGNCHESSETTLLNDNIFLKKASDMSKKSLMTKEVCDALLSLADMRESLYGLKSIEDDIEALGRCSLVGEKKLYHSLVLRISERKILQKLRNYASQSYKFTDHSSARKKLKRTTKKDS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi803g00006 460 PIRSF RMS1_SET 138 440 IPR011383 GO:0016279|GO:0018026
Sebi803g00006 460 PIRSF RMS1_SET 1 135 IPR011383 GO:0016279|GO:0018026
Sebi803g00006 460 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 405 - -
Sebi803g00006 460 SUPERFAMILY SET domain 4 260 IPR046341 -
Sebi803g00006 460 ProSiteProfiles SET domain profile. 22 241 IPR001214 GO:0005515
Sebi803g00006 460 Gene3D - 257 449 IPR036464 -
Sebi803g00006 460 Gene3D set domain protein methyltransferase, domain 1 4 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi803g00006 Sebi-Chr803 78271 82039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi803g00006 1 458 NAC Transcription Factor Family AT3G56570 46.741 1.08e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi803g00006 - K05302 gmx:100794971 674.47